Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  6
• Reference
  J:101423 Carter M, et al., Crooked tail (Cd) model of human folate-responsive neural tube defects is mutated in Wnt coreceptor lipoprotein receptor-related protein 6. Proc Natl Acad Sci U S A. 2005 Sep 6;102(36):12843-8
• ID
  MGI:3604451

Genes

Gene	Assay Type	Description
D6Mit132	PCR amplified length variant
D6Mit36	PCR amplified length variant
D6Mit329	PCR amplified length variant
D6Mit55	PCR amplified length variant
D6Mit115	PCR amplified length variant
D6Mit300	PCR amplified length variant
D6Mit217	PCR amplified length variant
Ms6hm3	PCR amplified length variant
D6Mit336	PCR amplified length variant
D6Mit335	PCR amplified length variant
D6Mit218	PCR amplified length variant
D6Mit52	PCR amplified length variant
D6Mit194	PCR amplified length variant
D6Mit135	PCR amplified length variant
D6Mit289	PCR amplified length variant
D6Mit13	PCR amplified length variant
D6Mit219a	PCR amplified length variant, direct sequencing
D6Mit111	PCR amplified length variant
Lrp6	visible phenotype	Lrp6
Gprc5a	SNP	Rai3
D6Mit301	PCR amplified length variant
D6Mit163	PCR amplified length variant
D6Mit302	PCR amplified length variant
D6Mit295	PCR amplified length variant
D6Mit294	PCR amplified length variant

Notes

• Reference
  The genetic mapping of the Cd mutation enabled the authors to identify genes within a physical genomic range as potential candidates for Crooked tail.
  The authors identified a mutation in Lpr6 as causitive of the Cd phenotype.

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>
• Strain
  Not Specified
• Male Parent
  <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>/<d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>
• Strain
  A/J
• Allele 1
  c from Not Specified
• Allele 2
  d from Not Specified

CROSS Data

MC #mice	D6Mit132	D6Mit36	D6Mit329	D6Mit55	D6Mit115	D6Mit300	D6Mit217	Ms6hm3	D6Mit336	D6Mit335	D6Mit218	D6Mit52	D6Mit194	D6Mit135	D6Mit289	D6Mit13	D6Mit219a	D6Mit111	Lrp6	Gprc5a	D6Mit301	D6Mit163	D6Mit302	D6Mit295	D6Mit294
154	d	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
110	d	d	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
75	d	d	d	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
74	d	d	d	d	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
69	d	d	d	d	d	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
44	d	d	d	d	d	d	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
33	d	d	d	d	d	d	d	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
32	d	d	d	d	d	d	d	d	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
31	d	d	d	d	d	d	d	d	d	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
20	d	d	d	d	d	d	d	d	d	d	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
17	d	d	d	d	d	d	d	d	d	d	d	c	c	c	c	c	c	c	c	c	c	c	c	c	c
15	d	d	d	d	d	d	d	d	d	d	d	d	c	c	c	c	c	c	c	c	c	c	c	c	c
12	d	d	d	d	d	d	d	d	d	d	d	d	d	c	c	c	c	c	c	c	c	c	c	c	c
10	d	d	d	d	d	d	d	d	d	d	d	d	d	d	c	c	c	c	c	c	c	c	c	c	c
9	d	d	d	d	d	d	d	d	d	d	d	d	d	d	d	c	c	c	c	c	c	c	c	c	c
5	d	d	d	d	d	d	d	d	d	d	d	d	d	d	d	d	c	c	c	c	c	c	c	c	c
4	d	d	d	d	d	d	d	d	d	d	d	d	d	d	d	d	d	c	c	c	c	c	c	c	c
2	d	d	d	d	d	d	d	d	d	d	d	d	d	d	d	d	d	d	c	c	c	c	c	c	c
2	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	d	d	d	d	d
10	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	d	d	d	d
29	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	d	d	d
31	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	d	d
123	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	d
132	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D6Mit132	D6Mit36	154	1043	14.765	1.098
D6Mit36	D6Mit329	110	1043	10.546	0.951
D6Mit329	D6Mit55	75	1043	7.191	0.800
D6Mit55	D6Mit115	74	1043	7.095	0.795
D6Mit115	D6Mit300	69	1043	6.616	0.770
D6Mit300	D6Mit217	44	1043	4.219	0.622
D6Mit217	Ms6hm3	33	1043	3.164	0.542
Ms6hm3	D6Mit336	32	1043	3.068	0.534
D6Mit336	D6Mit335	31	1043	2.972	0.526
D6Mit335	D6Mit218	20	1043	1.918	0.425
D6Mit218	D6Mit52	17	1043	1.630	0.392
D6Mit52	D6Mit194	15	1043	1.438	0.369
D6Mit194	D6Mit135	12	1043	1.151	0.330
D6Mit135	D6Mit289	10	1043	0.959	0.302
D6Mit289	D6Mit13	9	1043	0.863	0.286
D6Mit13	D6Mit219a	5	1043	0.479	0.214
D6Mit219a	D6Mit111	4	1043	0.384	0.191
D6Mit111	Lrp6	2	1043	0.192	0.135
Lrp6	Gprc5a	0	1043	0.000	0.000
Gprc5a	D6Mit301	2	1043	0.192	0.135
D6Mit301	D6Mit163	10	1043	0.959	0.302
D6Mit163	D6Mit302	29	1043	2.780	0.509
D6Mit302	D6Mit295	31	1043	2.972	0.526
D6Mit295	D6Mit294	123	1043	11.793	0.999