Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  11
• Reference
  J:67577 Miyoshi K, et al., Structure of the mouse stat 3/5 locus: evolution from drosophila to zebrafish to mouse. Genomics. 2001 Jan 15;71(2):150-5
• ID
  MGI:1931564

Genes

Gene	Assay Type
Cavin1	overlapping clones, direct sequencing
Stat3	overlapping clones, direct sequencing
Stat5a	overlapping clones, direct sequencing
Stat5b	overlapping clones, direct sequencing
Ghdc	overlapping clones, direct sequencing
Hcrt	overlapping clones, direct sequencing
Dhx58	overlapping clones, direct sequencing
Kat2a	overlapping clones, direct sequencing
Cnp	overlapping clones, direct sequencing
Dnajc7	overlapping clones, direct sequencing
D11Lgp3e	overlapping clones, direct sequencing
D11Lgp4e	overlapping clones, direct sequencing

Notes

• Experiment
  The authors isolated and sequenced phage, cDNA and BAC clones spanning a 500kb region from the locus containing the Stat3, Stat5a and Stat5b genes (seq IDs: AC021632, AC023193 and AF049104). The order and orientation of the genes on mouse Chromosome 11 was determined to be: 5'- Ptrf - 3' - 14kb - 5'- Stat3 - 3' - 3'-Stat5s - 5' - 5'- Stat5b - 3' - 5'- Ghdc - 3' - Hcrt - 3'- D11Lgp2e - 5' - 3'- Gcn5l2 - 5' - 5'- Cnp1 - 3' - 3'- Dnajc7 - 5' - 5'- D11Lgp3e - 3'. The Hcrt gene is located 18kb downstream ofthe Stat5b gene. The D11Lgp4e gene was also located downstream of the Stat5b gene. The sizes of the genes were estimated to be Hcrt (1.2kb), Ptrf (12kb), Gcn5l2 (7kb), Cnp1 (6.8kb), Dnajc7 (37kb), Stat5a (30kb), Stat5b (50kb) and Stat3 (30kb).