Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  2
• Reference
  J:56825 Kozak CA, et al., Identification and genetic mapping of differentially expressed genes in mice differing at the If1 interferon regulatory locus. Mamm Genome. 1999 Sep;10(9):853-7
• ID
  MGI:1345402

Genes

Gene	Assay Type	Description
Spi1
Rpl37a-rs3	Southern analysis	L37a probe
Map1a
Snap25
Rpl37a-rs4	Southern analysis	L37a probe
Gdf5
Src
DXHXS648e-rs1	Southern analysis	QM probe
Cd40
Rps8-rs3	Southern analysis	S8 probe
Pck1

CROSS

• Type
  Backcross, female
• Female Parent
  <n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n>/<m> <m> <m> <m> <m> <m> <m> <m> <m> <m> <m>
• Strain
  (NFS/N x M. m. musculus)F1
• Male Parent
  <m> <m> <m> <m> <m> <m> <m> <m> <m> <m> <m>/<m> <m> <m> <m> <m> <m> <m> <m> <m> <m> <m>
• Strain
  M. m. musculus
• Mapping Panel
  Kozak Skive (NFS/N)
• Allele 1
  n from NFS/N
• Allele 2
  m from M. m. musculus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Spi1	Rpl37a-rs3	3	26
Rpl37a-rs3	Map1a	2	27
Snap25	Rpl37a-rs4	9	59
Rpl37a-rs4	Gdf5	0	45
Rpl37a-rs4	Src	1	66
Src	DXHXS648e-rs1	1	69
DXHXS648e-rs1	Cd40	5	121
Cd40	Rps8-rs3	11	118
Rps8-rs3	Pck1	0	109

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Spi1	Rpl37a-rs3	3	29	10.345	5.655
Rpl37a-rs3	Map1a	2	29	6.897	4.705
Snap25	Rpl37a-rs4	9	68	13.235	4.109
Rpl37a-rs4	Gdf5	0	45	0.000	0.000
Rpl37a-rs4	Src	1	67	1.493	1.481
Src	DXHXS648e-rs1	1	70	1.429	1.418
DXHXS648e-rs1	Cd40	5	126	3.968	1.739
Cd40	Rps8-rs3	11	129	8.527	2.459
Rps8-rs3	Pck1	0	109	0.000	0.000