Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  8
• Reference
  J:48971 Grewal PK, et al., High-resolution mapping of mouse chromosome 8 identifies an evolutionary chromosomal breakpoint. Mamm Genome. 1998 Aug;9(8):603-7
• ID
  MGI:1278301

Genes

Gene	Assay Type	Description
D8Mit224	reported elsewhere
D8Mit259	reported elsewhere
Frg1	PCR amplified length variant	Frg1-pA, Frg1-pB
Pcm1	PCR amplified length variant	Pcm1-pA, Pcm1-pB
D8Mit5	reported elsewhere
Fat1	PCR amplified length variant	Fath-pA, Fath-pB
D8Mit192	reported elsewhere
Klkb1	PCR amplified length variant	Klk3-pA, Klk3-pB
D8Mit175	reported elsewhere
Slc25a4	PCR amplified length variant	Ant1-pA, Ant1-pB
Casp3	PCR amplified length variant	Casp3-pA, Casp3-pB
Clcn3	PCR amplified length variant	Clc3-pA, Clc3-pB
Tll1	reported elsewhere
D8Mit261	reported elsewhere
Cpe	PCR amplified length variant	Cpe-pA, Cpe-pB
Atp6v1b1	PCR amplified length variant	Atp6b1-pA, Atp6b1-pB
D8Mit31	reported elsewhere
D8Mit9	reported elsewhere
D8Mit133	reported elsewhere
Ucp1	PCR amplified length variant	Ucp-pA, Ucp-pB
D8Mit75	reported elsewhere
Cacna1a	PCR amplified length variant	Ucp-pA, Ucp-pB

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l>/<h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h>
• Strain
  (C57BL/6J x SPR or SEG/Pas)F1
• Male Parent
  <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h>/<h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h> <h>
• Strain
  SPR or SEG/Pas or C57BL/6J
• Mapping Panel
  EUCIB
• Allele 1
  l from homozygous
• Allele 2
  h from heterozygous

CROSS Data

MC #mice	D8Mit224	D8Mit259	Frg1	Pcm1	D8Mit5	Fat1	D8Mit192	Klkb1	D8Mit175	Slc25a4	Casp3	Clcn3	Tll1	D8Mit261	Cpe	Atp6v1b1	D8Mit31	D8Mit9	D8Mit133	Ucp1	D8Mit75	Cacna1a
24	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
41	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h
2	h	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
1	l	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h
2	h	h	h	h	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
1	l	l	l	l	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h
1	h	h	h	h	h	h	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
1	h	h	h	h	h	h	h	h	l	l	l	l	l	l	l	l	l	l	l	l	l	l
2	h	h	h	h	h	h	h	h	h	l	l	l	l	l	l	l	l	l	l	l	l	l
3	h	h	h	h	h	h	h	h	h	h	h	l	l	l	l	l	l	l	l	l	l	l
1	l	l	l	l	l	l	l	l	l	l	l	h	h	h	h	h	h	h	h	h	h	h
2	h	h	h	h	h	h	h	h	h	h	h	h	l	l	l	l	l	l	l	l	l	l
1	l	l	l	l	l	l	l	l	l	l	l	l	h	h	h	h	h	h	h	h	h	h
1	l	l	l	l	l	l	l	l	l	l	l	l	l	h	h	h	h	h	h	h	h	h
1	l	l	l	l	l	l	l	l	l	l	l	l	l	l	h	h	h	h	h	h	h	h
3	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	l	l	l	l	l	l	l
3	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	h	h	h	h	h	h	h
1	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	l	l	l	l	l	l
3	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	h	h	h	h	h	h
1	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	h	h	h	h	h
2	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	l	l	l	l	l
2	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	l	l	l	l
4	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	h	h	h	h
2	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	l	l	l
7	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	h	h	h
2	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	.	l	l
1	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	.	h	h
1	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	l	l
1	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	h	h
1	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	h	l
2	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	h

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D8Mit224	D8Mit259	3	120	2.500	1.425
D8Mit259	Frg1	0	120	0.000	0.000
Frg1	Pcm1	0	120	0.000	0.000
Pcm1	D8Mit5	3	120	2.500	1.425
D8Mit5	Fat1	0	120	0.000	0.000
Fat1	D8Mit192	1	120	0.833	0.830
D8Mit192	Klkb1	0	120	0.000	0.000
Klkb1	D8Mit175	1	120	0.833	0.830
D8Mit175	Slc25a4	2	120	1.667	1.169
Slc25a4	Casp3	0	120	0.000	0.000
Casp3	Clcn3	4	120	3.333	1.639
Clcn3	Tll1	3	120	2.500	1.425
Tll1	D8Mit261	1	120	0.833	0.830
D8Mit261	Cpe	1	120	0.833	0.830
Cpe	Atp6v1b1	6	120	5.000	1.990
Atp6v1b1	D8Mit31	4	120	3.333	1.639
D8Mit31	D8Mit9	3	120	2.500	1.425
D8Mit9	D8Mit133	6	120	5.000	1.990
D8Mit133	Ucp1	9	117	7.692	2.464
Ucp1	D8Mit75	2	117	1.709	1.198
D8Mit75	Cacna1a	3	120	2.500	1.425