Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  9
• Reference
  J:45334 Rausa F, et al., The cut-homeodomain transcriptional activator HNF-6 is coexpressed with its target gene HNF-3 beta in the developing murine liver and pancreas. Dev Biol. 1997 Dec 15;192(2):228-46
• ID
  MGI:1196489

Genes

Gene	Assay Type	Description
Csk	reported elsewhere
Rora	reported elsewhere
Foxb1	Southern analysis	Mf3 cDNA
Onecut1	Southern analysis	Hnf6 cDNA
Myo5a	reported elsewhere
Gsta1	reported elsewhere

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Csk	Rora	Foxb1	Onecut1	Myo5a	Gsta1
57	b	b	b	b	b	b
53	s	s	s	s	s	s
4	s	b	b	b	b	b
3	b	s	s	s	s	s
0	s	s	b	b	b	b
0	b	b	s	s	s	s
3	s	s	s	b	b	b
3	b	b	b	s	s	s
0	s	s	s	s	b	b
0	b	b	b	b	s	s
1	s	s	s	s	s	b
0	b	b	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Csk	Rora	3	59
Rora	Foxb1	0	26
Foxb1	Onecut1	1	26
Onecut1	Myo5a	0	69
Myo5a	Gsta1	1	48

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Csk	Rora	10	186	5.376	1.654
Rora	Foxb1	0	150	0.000	0.000
Foxb1	Onecut1	7	151	4.636	1.711
Onecut1	Myo5a	0	193	0.000	0.000
Myo5a	Gsta1	2	173	1.156	0.813