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Gene Expression Image Detail
Reference
Figure
ID
J:157819 Shimogori T, et al., Nat Neurosci. 2010;13(6):767-75
S7
MGI:4450949
Image
Caption Shh (brown) is included as a second color for each ISH sample to allow reliable assignment of section plane. Expression of each test transcript (blue) in SCN is indicated by a black arrow. (a-d) A schematic drawing indicating both the plane of section (black) and the region of Shh expression (pink) is shown for each developmental stage shown. Scale bar in e= 0.45 mm (a,e,i,m,q,u,y); 0.5 mm (b,f,j,n,r,v,z); 0.55 mm (c,g,k,o,s,w,aa); and 0.6 mm (d,h,l,p,t,x,bb).
This image is from Shimogori T, Nat Neurosci 2010;(): and is displayed with the permission of The Nature Publishing Group who owns the Copyright.
Associated
Assays
Label Assay & Result Details (Gene Symbol) Spatial Mapping
_e MGI:4450905 (Lhx1) MGI:4452154 (Shh)
_f MGI:4450905 (Lhx1) MGI:4452154 (Shh)
_g MGI:4450905 (Lhx1) MGI:4452154 (Shh)
_h MGI:4450905 (Lhx1) MGI:4452154 (Shh)
_i MGI:4450872 (Igfbp5) MGI:4452154 (Shh)
_j MGI:4450872 (Igfbp5) MGI:4452154 (Shh)
_k MGI:4450872 (Igfbp5) MGI:4452154 (Shh)
_l MGI:4450872 (Igfbp5) MGI:4452154 (Shh)
_m MGI:4450899 (Id4) MGI:4452154 (Shh)
_n MGI:4450899 (Id4) MGI:4452154 (Shh)
_o MGI:4450899 (Id4) MGI:4452154 (Shh)
_p MGI:4450899 (Id4) MGI:4452154 (Shh)
_q MGI:4450778 (Rorb) MGI:4452154 (Shh)
_r MGI:4450778 (Rorb) MGI:4452154 (Shh)
_s MGI:4450778 (Rorb) MGI:4452154 (Shh)
_t MGI:4450778 (Rorb) MGI:4452154 (Shh)
_u MGI:4450824 (Sema6d) MGI:4452154 (Shh)
_v MGI:4450824 (Sema6d) MGI:4452154 (Shh)
_w MGI:4450824 (Sema6d) MGI:4452154 (Shh)
_x MGI:4450824 (Sema6d) MGI:4452154 (Shh)
_y MGI:4450720 (Rora) MGI:4452154 (Shh)
_z MGI:4450720 (Rora) MGI:4452154 (Shh)
_aa MGI:4450720 (Rora) MGI:4452154 (Shh)
_bb MGI:4450720 (Rora) MGI:4452154 (Shh)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
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