Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	NLRP9	HGNC:22941 (HGNC) 338321 (Entrez Gene) 609663 (OMIM) NLRP9 (Alliance of Genome Resources)	Chr19 q13.42	Chr19:55708438-55738402 (-) GRCh38		Q7RTR0 (UniProt | EBI) NM_176820 (RefSeq)
mouse	Nlrp9c	MGI:3028627 (MGI) 330490 (Entrez Gene) Gene Tree Nlrp9c (Alliance of Genome Resources)	Chr7 14.44 cM	Chr7:26064116-26103125 (-) GRCm39		330490 (NCBI Gene Model) Q66X01 (UniProt | EBI) NM_001042612 (RefSeq)
rat	Nlrp9	RGD:1308981 (Rat Genome Database) 292577 (Entrez Gene) Nlrp9 (Alliance of Genome Resources)	Chr1 q12			NP_001162620 (RefSeq) NM_001169149 (RefSeq)
zebrafish	si:ch211-194e1.7	ZDB-GENE-081105-104 (Zebrafish Model Organism Database) 565044 (Entrez Gene) si:ch211-194e1.7 (Alliance of Genome Resources)	Chr8			XP_068079338 (RefSeq)
	si:ch211-236p5.3	ZDB-GENE-081028-31 (Zebrafish Model Organism Database) 100002266 (Entrez Gene) si:ch211-236p5.3 (Alliance of Genome Resources)	Chr17
	si:ch211-255g12.8	ZDB-GENE-081104-39 (Zebrafish Model Organism Database) 565945 (Entrez Gene) si:ch211-255g12.8 (Alliance of Genome Resources)	Chr8			XP_068079196 (RefSeq)
	si:dkey-29j8.1	ZDB-GENE-110913-11 (Zebrafish Model Organism Database) 100334221 (Entrez Gene) si:dkey-29j8.1 (Alliance of Genome Resources)	Chr4			XP_068076225 (RefSeq)
	si:dkey-222h21.7	ZDB-GENE-081031-33 (Zebrafish Model Organism Database) 100332268 (Entrez Gene) si:dkey-222h21.7 (Alliance of Genome Resources)	Chr1
	si:dkey-222h21.8	ZDB-GENE-081031-103 (Zebrafish Model Organism Database) 795597 (Entrez Gene) si:dkey-222h21.8 (Alliance of Genome Resources)	Chr1
	si:dkey-222h21.11	ZDB-GENE-081031-32 (Zebrafish Model Organism Database) 103909520 (Entrez Gene) si:dkey-222h21.11 (Alliance of Genome Resources)	Chr1			XP_009294248 (RefSeq)
	si:dkey-240n22.1	ZDB-GENE-070705-407 (Zebrafish Model Organism Database) 103908651 (Entrez Gene) si:dkey-240n22.1 (Alliance of Genome Resources)	Chr4			XP_068076664 (RefSeq)
	si:dkey-264f17.2	ZDB-GENE-110913-14 (Zebrafish Model Organism Database) 103910943 (Entrez Gene) si:dkey-264f17.2 (Alliance of Genome Resources)	Chr4
	si:rp71-7l19.2	ZDB-GENE-081103-31 (Zebrafish Model Organism Database) 100000651 (Entrez Gene) si:rp71-7l19.2 (Alliance of Genome Resources)	Chr4

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.