Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRAK1	HGNC:29947 (HGNC) 22906 (Entrez Gene) 608112 (OMIM) TRAK1 (Alliance of Genome Resources)	Chr3 p22.1	Chr3:42013093-42225890 (+) GRCh38	developmental and epileptic encephalopathy 68	Q9UPV9 (UniProt | EBI) NM_001042646 (RefSeq)
mouse	Trak1	MGI:1914345 (MGI) 67095 (Entrez Gene) Gene Tree Trak1 (Alliance of Genome Resources)	Chr9 72.41 cM	Chr9:121126568-121303984 (+) GRCm39	Stiff-Person syndrome	ENSMUSG00000032536 (Ensembl Gene Model) ENSMUSP00000158925 (Ensembl) ENSMUST00000238988 (Ensembl)
rat	Trak1	RGD:1307844 (Rat Genome Database) 316085 (Entrez Gene) Trak1 (Alliance of Genome Resources)	Chr8 q32			NP_001128037 (RefSeq) NM_001134565 (RefSeq)
zebrafish	trak1a	ZDB-GENE-100922-182 (Zebrafish Model Organism Database) 100002689 (Entrez Gene) trak1a (Alliance of Genome Resources)	Chr16			XP_009290328 (RefSeq)
	trak1b	ZDB-GENE-150910-1 (Zebrafish Model Organism Database) 100537238 (Entrez Gene) trak1b (Alliance of Genome Resources)	ChrUN			XP_021326516 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.