Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRAK1
  • Mouse genes Trak1
  • Rat genes Trak1
  • Zfish genes trak1a,trak1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trak1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0050811	GABA receptor binding	Trak1	IDA		Mouse	PMID:16380713
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:O60282	Human	PMID:15644324
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:Q8IXI1	Human	PMID:16630562
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:Q8IXI2	Human	PMID:16630562
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:O14964	Human	PMID:18675823
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:Q8IXI2	Human	PMID:19135897
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:Q8VI64	Human	PMID:19528298
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:O15294	Human	PMID:24995978
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:P56558	Human	PMID:24995978
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:Q2PQA9	Human	PMID:24995978
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:Q8IXI1	Human	PMID:24995978
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:Q8IXI2	Human	PMID:24995978
Molecular Function	GO:0005515	protein binding	TRAK1	IPI	UniProtKB:O15294	Human	PMID:27705803
Molecular Function	GO:0030911	TPR domain binding	Trak1	IDA		Rat	PMID:12435728|RGD:632248
Cellular Component	GO:0044295	axonal growth cone	Trak1	IDA		Rat	PMID:25653102|RGD:13208833
Cellular Component	GO:0005737	cytoplasm	TRAK1	IDA		Human	PMID:19528298
Cellular Component	GO:0005737	cytoplasm	trak1b	IDA		Zfish	PMID:25139857
Cellular Component	GO:0030425	dendrite	Trak1	IDA		Rat	PMID:25653102|RGD:13208833
Cellular Component	GO:0005769	early endosome	TRAK1	IDA		Human	PMID:18675823
Cellular Component	GO:0005739	mitochondrion	TRAK1	IDA		Human	PMID:15644324
Cellular Component	GO:0005739	mitochondrion	TRAK1	IDA		Human	PMID:18675823
Cellular Component	GO:0005739	mitochondrion	TRAK1	IDA		Human	PMID:19528298
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Trak1	IDA		Rat	PMID:25653102|RGD:13208833
Biological Process	GO:0098957	anterograde axonal transport of mitochondrion	Trak1	IMP		Mouse	MGI:MGI:5494787|PMID:23395375
Biological Process	GO:0019896	axonal transport of mitochondrion	Trak1	IMP		Rat	PMID:23395375|RGD:13208834
Biological Process	GO:0048813	dendrite morphogenesis	Trak1	IMP		Rat	PMID:23395375|RGD:13208834
Biological Process	GO:0008333	endosome to lysosome transport	TRAK1	IDA		Human	PMID:18675823
Biological Process	GO:0050772	positive regulation of axonogenesis	Trak1	IMP		Rat	PMID:23395375|RGD:13208834

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern