Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CCDC127	HGNC:30520 (HGNC) 133957 (Entrez Gene) CCDC127 (Alliance of Genome Resources)	Chr5 p15.33	Chr5:196868-218153 (-) GRCh38		Q96BQ5 (UniProt | EBI) NM_145265 (RefSeq)
mouse	Ccdc127	MGI:1914683 (MGI) 67433 (Entrez Gene) Gene Tree Ccdc127 (Alliance of Genome Resources)	Chr13 40.17 cM	Chr13:74498436-74513902 (+) GRCm39		67433 (NCBI Gene Model) Q3TC33 (UniProt | EBI) NM_001168658 (RefSeq)
rat	Ccdc127	RGD:735106 (Rat Genome Database) 308060 (Entrez Gene) Ccdc127 (Alliance of Genome Resources)	Chr1 p11			Q6PEB9 (UniProt | EBI) NM_198766 (RefSeq)
zebrafish	ccdc127a	ZDB-GENE-060825-61 (Zebrafish Model Organism Database) 751722 (Entrez Gene) ccdc127a (Alliance of Genome Resources)	Chr16			NP_001038897 (RefSeq) NM_001045432 (RefSeq)
	ccdc127b	ZDB-GENE-060503-656 (Zebrafish Model Organism Database) 792067 (Entrez Gene) ccdc127b (Alliance of Genome Resources)	Chr19			NP_001076352 (RefSeq) NM_001082883 (RefSeq)
	zmp:0000000930	ZDB-GENE-130530-933 (Zebrafish Model Organism Database) 100151586 (Entrez Gene) zmp:0000000930 (Alliance of Genome Resources)	Chr16			XP_005173586 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.