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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRIM17 HGNC:13430 (HGNC)
51127 (Entrez Gene)
606123 (OMIM)
TRIM17 (Alliance of Genome Resources)
Chr1 q42.13 Chr1:228407935-228416861 (-)
GRCh38
Q9Y577 (UniProt | EBI)
NM_001024940 (RefSeq)
mouse Trim17 MGI:1861440 (MGI)
56631 (Entrez Gene)
Gene Tree
Trim17 (Alliance of Genome Resources)
Chr11 36.38 cM Chr11:58845511-58863923 (+)
GRCm39
56631 (NCBI Gene Model)
Q7TPM3 (UniProt | EBI)
NM_031172 (RefSeq)
rat Trim17 RGD:69290 (Rat Genome Database)
64702 (Entrez Gene)
Trim17 (Alliance of Genome Resources)
Chr10 q22 Q9WV59 (UniProt | EBI)
NM_022798 (RefSeq)
zebrafish btr04 ZDB-GENE-060825-109 (Zebrafish Model Organism Database)
565512 (Entrez Gene)
btr04 (Alliance of Genome Resources)
Chr7 XP_017212468 (RefSeq)
NM_001077168 (RefSeq)
btr05 ZDB-GENE-080219-8 (Zebrafish Model Organism Database)
794264 (Entrez Gene)
btr05 (Alliance of Genome Resources)
Chr7 NP_001373305 (RefSeq)
NM_001386376 (RefSeq)
btr06 ZDB-GENE-080516-2 (Zebrafish Model Organism Database)
100151764 (Entrez Gene)
btr06 (Alliance of Genome Resources)
Chr7 NP_001120951 (RefSeq)
NM_001127479 (RefSeq)
btr07 ZDB-GENE-110921-1 (Zebrafish Model Organism Database)
793570 (Entrez Gene)
btr07 (Alliance of Genome Resources)
Chr7 XP_017212469 (RefSeq)
btr18 ZDB-GENE-080213-2 (Zebrafish Model Organism Database)
571162 (Entrez Gene)
btr18 (Alliance of Genome Resources)
Chr19 NP_001410634 (RefSeq)
NM_001423705 (RefSeq)
btr20 ZDB-GENE-060421-3419 (Zebrafish Model Organism Database)
678596 (Entrez Gene)
btr20 (Alliance of Genome Resources)
Chr19 NP_001410635 (RefSeq)
NM_001423706 (RefSeq)
btr21 ZDB-GENE-081031-80 (Zebrafish Model Organism Database)
100330973 (Entrez Gene)
btr21 (Alliance of Genome Resources)
Chr19
btr22 ZDB-GENE-080402-4 (Zebrafish Model Organism Database)
100144555 (Entrez Gene)
btr22 (Alliance of Genome Resources)
Chr19 NP_001410830 (RefSeq)
NM_001423901 (RefSeq)
btr23 ZDB-GENE-070705-375 (Zebrafish Model Organism Database)
100334710 (Entrez Gene)
btr23 (Alliance of Genome Resources)
Chr19 XP_009292260 (RefSeq)
btr24 ZDB-GENE-070705-376 (Zebrafish Model Organism Database)
100000030 (Entrez Gene)
btr24 (Alliance of Genome Resources)
Chr19 XP_017207881 (RefSeq)
NM_001100067 (RefSeq)
btr25 ZDB-GENE-070705-377 (Zebrafish Model Organism Database)
571141 (Entrez Gene)
btr25 (Alliance of Genome Resources)
Chr19 NP_001373741 (RefSeq)
NM_001386812 (RefSeq)
btr26 ZDB-GENE-070705-378 (Zebrafish Model Organism Database)
100149795 (Entrez Gene)
btr26 (Alliance of Genome Resources)
Chr19 XP_005173810 (RefSeq)
btr29 ZDB-GENE-090512-2 (Zebrafish Model Organism Database)
797384 (Entrez Gene)
btr29 (Alliance of Genome Resources)
Chr19 NP_001159606 (RefSeq)
NM_001166134 (RefSeq)
btr32 ZDB-GENE-060421-3827 (Zebrafish Model Organism Database)
678629 (Entrez Gene)
btr32 (Alliance of Genome Resources)
Chr23 NP_001035464 (RefSeq)
NM_001040374 (RefSeq)
si:ch211-216p19.6 ZDB-GENE-160728-7 (Zebrafish Model Organism Database)
100006636 (Entrez Gene)
si:ch211-216p19.6 (Alliance of Genome Resources)
Chr7 NP_001373742 (RefSeq)
NM_001386813 (RefSeq)
si:dkey-46i9.6 ZDB-GENE-160114-63 (Zebrafish Model Organism Database)
571944 (Entrez Gene)
si:dkey-46i9.6 (Alliance of Genome Resources)
Chr7 XP_700683 (RefSeq)
zgc:173581 ZDB-GENE-080212-7 (Zebrafish Model Organism Database)
100137104 (Entrez Gene)
zgc:173581 (Alliance of Genome Resources)
Chr19 XP_021323931 (RefSeq)
NM_001114701 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory