Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SMU1	HGNC:18247 (HGNC) 55234 (Entrez Gene) 617811 (OMIM) SMU1 (Alliance of Genome Resources)	Chr9 p21.1	Chr9:33041765-33076674 (-) GRCh38		Q2TAY7 (UniProt | EBI) NM_018225 (RefSeq)
mouse	Smu1	MGI:1915546 (MGI) 74255 (Entrez Gene) Gene Tree Smu1 (Alliance of Genome Resources)	Chr4 20.46 cM	Chr4:40736542-40757923 (-) GRCm39		ENSMUSG00000028409 (Ensembl Gene Model) ENSMUSP00000030117 (Ensembl) ENSMUST00000030117 (Ensembl)
rat	Smu1	RGD:620694 (Rat Genome Database) 117541 (Entrez Gene) Smu1 (Alliance of Genome Resources)	Chr5 q22			Q99M63 (UniProt | EBI) NM_057195 (RefSeq)
zebrafish	smu1a	ZDB-GENE-040426-916 (Zebrafish Model Organism Database) 393168 (Entrez Gene) smu1a (Alliance of Genome Resources)	Chr14			Q7ZVA0 (UniProt | EBI) NM_200199 (RefSeq)
	smu1b	ZDB-GENE-130530-635 (Zebrafish Model Organism Database) 570074 (Entrez Gene) smu1b (Alliance of Genome Resources)	Chr1			XP_017211927 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.