Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SGCA	HGNC:10805 (HGNC) 6442 (Entrez Gene) 600119 (OMIM) SGCA (Alliance of Genome Resources)	Chr17 q21.33	Chr17:50164214-50175928 (+) GRCh38	autosomal recessive limb-girdle muscular dystrophy type 2D muscular dystrophy	Q16586 (UniProt | EBI) NM_000023 (RefSeq)
mouse	Sgca	MGI:894698 (MGI) 20391 (Entrez Gene) Gene Tree Sgca (Alliance of Genome Resources)	Chr11 59.01 cM	Chr11:94853617-94867153 (-) GRCm39	autosomal recessive limb-girdle muscular dystrophy type 2D	ENSMUSG00000001508 (Ensembl Gene Model) ENSMUSP00000099451 (Ensembl) ENSMUST00000103162 (Ensembl)
rat	Sgca	RGD:1308062 (Rat Genome Database) 303468 (Entrez Gene) Sgca (Alliance of Genome Resources)	Chr10 q26			NP_001100509 (RefSeq) NM_001395601 (RefSeq)
zebrafish	sgca	ZDB-GENE-041111-121 (Zebrafish Model Organism Database) 557170 (Entrez Gene) sgca (Alliance of Genome Resources)	Chr12			XP_685270 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.