Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SGCA
  • Mouse genes Sgca
  • Rat genes Sgca
  • Zfish genes sgca
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sgca

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SGCA	IPI	UniProtKB:O43765	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	SGCA	IPI	UniProtKB:O43765	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SGCA	IPI	UniProtKB:O43765	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	SGCA	IPI	UniProtKB:O43765	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	SGCA	IPI	UniProtKB:O43765	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCA	IPI	UniProtKB:Q96EQ0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCA	IPI	UniProtKB:P37173	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SGCA	IPI	UniProtKB:P50454	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SGCA	IPI	UniProtKB:P54725	Human	PMID:32814053
Cellular Component	GO:0005911	cell-cell junction	Sgca	IDA		Mouse	PMID:19531352
Cellular Component	GO:0016011	dystroglycan complex	Sgca	IDA		Mouse	PMID:10678176
Cellular Component	GO:0045121	membrane raft	Sgca	IDA		Mouse	PMID:11259414
Cellular Component	GO:0005886	plasma membrane	Sgca	IDA		Mouse	PMID:10481911
Cellular Component	GO:0016012	sarcoglycan complex	Sgca	IDA		Mouse	PMID:16524571
Cellular Component	GO:0042383	sarcolemma	Sgca	IDA		Mouse	PMID:19531352
Cellular Component	GO:0042383	sarcolemma	Sgca	IDA		Mouse	PMID:10678176
Cellular Component	GO:0042383	sarcolemma	Sgca	IDA		Mouse	PMID:11115849
Cellular Component	GO:0042383	sarcolemma	Sgca	IDA		Mouse	PMID:11259414
Cellular Component	GO:0042383	sarcolemma	Sgca	IDA		Mouse	PMID:10481911
Biological Process	GO:0014894	response to denervation involved in regulation of muscle adaptation	Sgca	IEP		Rat	PMID:8906620|RGD:11552584
Biological Process	GO:0043403	skeletal muscle tissue regeneration	Sgca	IEP		Rat	PMID:12086334|RGD:11541049

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern