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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human STX2 HGNC:3403 (HGNC)
2054 (Entrez Gene)
132350 (OMIM)
STX2 (Alliance of Genome Resources)
Chr12 q24.33 Chr12:130789600-130839254 (-)
GRCh38
P32856 (UniProt | EBI)
NM_194356 (RefSeq)
mouse Stx2 MGI:108059 (MGI)
13852 (Entrez Gene)
Gene Tree
Stx2 (Alliance of Genome Resources)
Chr5 67.99 cM Chr5:129061621-129085638 (-)
GRCm39
ENSMUSG00000029428 (Ensembl Gene Model)
ENSMUSP00000031378 (Ensembl)
ENSMUST00000031378 (Ensembl)
rat Stx2 RGD:2558 (Rat Genome Database)
25130 (Entrez Gene)
Stx2 (Alliance of Genome Resources)
Chr12 q13 P50279 (UniProt | EBI)
NM_012748 (RefSeq)
zebrafish stx2a ZDB-GENE-040801-80 (Zebrafish Model Organism Database)
445167 (Entrez Gene)
stx2a (Alliance of Genome Resources)
Chr21 NP_001003561 (RefSeq)
NM_001003561 (RefSeq)
stx2b ZDB-GENE-091204-424 (Zebrafish Model Organism Database)
100536636 (Entrez Gene)
stx2b (Alliance of Genome Resources)
Chr8 XP_005167314 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory