Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PCP4	HGNC:8742 (HGNC) 5121 (Entrez Gene) 601629 (OMIM) PCP4 (Alliance of Genome Resources)	Chr21 q22.2	Chr21:39867438-39929397 (+) GRCh38		P48539 (UniProt | EBI) NM_006198 (RefSeq)
mouse	Pcp4	MGI:97509 (MGI) 18546 (Entrez Gene) Gene Tree Pcp4 (Alliance of Genome Resources)	Chr16 56.97 cM	Chr16:96268806-96326993 (+) GRCm39		18546 (NCBI Gene Model) P63054 (UniProt | EBI) NM_008791 (RefSeq)
rat	Pcp4	RGD:3271 (Rat Genome Database) 25510 (Entrez Gene) Pcp4 (Alliance of Genome Resources)	Chr11 q11			P63055 (UniProt | EBI) NM_013002 (RefSeq)
zebrafish	pcp4a	ZDB-GENE-031118-105 (Zebrafish Model Organism Database) 386848 (Entrez Gene) pcp4a (Alliance of Genome Resources)	Chr10			NP_001159594 (RefSeq) NM_001166122 (RefSeq)
	pcp4b	ZDB-GENE-031118-117 (Zebrafish Model Organism Database) 386963 (Entrez Gene) pcp4b (Alliance of Genome Resources)	Chr15			XP_021321988 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.