HLA-DOA Vertebrate HGNC

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Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/23/2024 MGI 6.23

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	HLA-DOA	HGNC:4936 (HGNC) 3111 (Entrez Gene) 142930 (OMIM) HLA-DOA (Alliance of Genome Resources)	Chr6 p21.32	Chr6:33004182-33009591 (-) GRCh38	occupational asthma	P06340 (UniProt \| EBI) NM_015851 (RefSeq)
mouse	H2-Oa	MGI:95924 (MGI) 15001 (Entrez Gene) Gene Tree H2-Oa (Alliance of Genome Resources)	Chr17 17.98 cM	Chr17:34311314-34314208 (+) GRCm39		ENSMUSG00000024334 (Ensembl Gene Model) ENSMUSP00000025192 (Ensembl) ENSMUST00000025192 (Ensembl)
rat	RT1-DOa	RGD:3477 (Rat Genome Database) 24984 (Entrez Gene) RT1-DOa (Alliance of Genome Resources)	Chr20 p12			NP_898874 (RefSeq) NM_183051 (RefSeq)
zebrafish	mhc2d8.35a1	ZDB-GENE-131121-38 (Zebrafish Model Organism Database) 795595 (Entrez Gene) mhc2d8.35a1 (Alliance of Genome Resources)	Chr8			XP_009302401 (RefSeq)
	mhc2d8.37a1	ZDB-GENE-091204-401 (Zebrafish Model Organism Database) 103908641 (Entrez Gene) mhc2d8.37a1 (Alliance of Genome Resources)	Chr8			XP_005167290 (RefSeq)
	mhc2d8.46a	ZDB-GENE-081105-52 (Zebrafish Model Organism Database) 571282 (Entrez Gene) mhc2d8.46a (Alliance of Genome Resources)	Chr8			XP_699949 (RefSeq)
	mhc2dga	ZDB-GENE-030616-505 (Zebrafish Model Organism Database) 368614 (Entrez Gene) mhc2dga (Alliance of Genome Resources)	Chr8			NP_001007206 (RefSeq) NM_001007205 (RefSeq)
	si:busm1-194e12.8	ZDB-GENE-030616-323 (Zebrafish Model Organism Database) 368816 (Entrez Gene) si:busm1-194e12.8 (Alliance of Genome Resources)	Chr8			NP_001007430 (RefSeq) NM_001007429 (RefSeq)
	zgc:123107	ZDB-GENE-051113-192 (Zebrafish Model Organism Database) 641415 (Entrez Gene) zgc:123107 (Alliance of Genome Resources)	Chr4			NP_001077290 (RefSeq) NM_001037404 (RefSeq)