Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	EPHA4	HGNC:3388 (HGNC) 2043 (Entrez Gene) 602188 (OMIM) EPHA4 (Alliance of Genome Resources)	Chr2 q36.1	Chr2:221418027-221574202 (-) GRCh38		P54764 (UniProt | EBI) NM_004438 (RefSeq)
mouse	Epha4	MGI:98277 (MGI) 13838 (Entrez Gene) Gene Tree Epha4 (Alliance of Genome Resources)	Chr1 39.55 cM	Chr1:77343822-77491725 (-) GRCm39		ENSMUSG00000026235 (Ensembl Gene Model) ENSMUSP00000027451 (Ensembl) ENSMUST00000027451 (Ensembl)
rat	Epha4	RGD:1560587 (Rat Genome Database) 316539 (Entrez Gene) Epha4 (Alliance of Genome Resources)	Chr9 q33			NP_001155883 (RefSeq) NM_001162411 (RefSeq)
zebrafish	epha4a	ZDB-GENE-001207-7 (Zebrafish Model Organism Database) 64271 (Entrez Gene) epha4a (Alliance of Genome Resources)	Chr2			O13148 (UniProt | EBI) NM_001365171 (RefSeq)
	epha4l	ZDB-GENE-990415-61 (Zebrafish Model Organism Database) 30687 (Entrez Gene) epha4l (Alliance of Genome Resources)	Chr15			XP_687698 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.