Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRPC4AP	HGNC:16181 (HGNC) 26133 (Entrez Gene) 608430 (OMIM) TRPC4AP (Alliance of Genome Resources)	Chr20 q11.22	Chr20:35002404-35092807 (-) GRCh38		Q8TEL6 (UniProt | EBI) NM_199368 (RefSeq)
mouse	Trpc4ap	MGI:1930751 (MGI) 56407 (Entrez Gene) Gene Tree Trpc4ap (Alliance of Genome Resources)	Chr2 77.26 cM	Chr2:155476197-155534304 (-) GRCm39		56407 (NCBI Gene Model) Q9JLV2 (UniProt | EBI) NM_001163452 (RefSeq)
rat	Trpc4ap	RGD:1309914 (Rat Genome Database) 362247 (Entrez Gene) Trpc4ap (Alliance of Genome Resources)	Chr3 q42			NP_001094218 (RefSeq) NM_001100748 (RefSeq)
zebrafish	trpc4apa	ZDB-GENE-000330-3 (Zebrafish Model Organism Database) 58090 (Entrez Gene) trpc4apa (Alliance of Genome Resources)	Chr11			NP_571644 (RefSeq) NM_131569 (RefSeq)
	trpc4apb	ZDB-GENE-000330-2 (Zebrafish Model Organism Database) 58089 (Entrez Gene) trpc4apb (Alliance of Genome Resources)	Chr23			NP_001297022 (RefSeq) NM_131568 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.