Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes YBX2
  • Mouse genes Ybx2
  • Rat genes Ybx2
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ybx2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Ybx2	IDA		Mouse	PMID:15665108
Molecular Function	GO:0008289	lipid binding	Ybx2	IDA		Mouse	PMID:15665108
Molecular Function	GO:0003730	mRNA 3'-UTR binding	Ybx2	IDA		Mouse	PMID:10772793
Molecular Function	GO:0003729	mRNA binding	Ybx2	IDA		Mouse	PMID:15665108
Molecular Function	GO:0003729	mRNA binding	Ybx2	IDA		Mouse	PMID:12648488
Molecular Function	GO:0003729	mRNA binding	Ybx2	IDA		Mouse	PMID:17035640
Molecular Function	GO:0003729	mRNA binding	Ybx2	IDA		Mouse	PMID:12297523
Molecular Function	GO:0043021	ribonucleoprotein complex binding	Ybx2	IDA		Mouse	PMID:17035640
Molecular Function	GO:0045182	translation regulator activity	Ybx2	IDA		Mouse	PMID:12297523
Cellular Component	GO:0005737	cytoplasm	Ybx2	IDA		Mouse	PMID:11566752
Cellular Component	GO:0005737	cytoplasm	Ybx2	IDA		Mouse	PMID:12648488
Cellular Component	GO:0005737	cytoplasm	Ybx2	IDA		Rat	PMID:16150897|RGD:2311249
Cellular Component	GO:0005844	polysome	Ybx2	IDA		Mouse	PMID:17035640
Cellular Component	GO:1990904	ribonucleoprotein complex	Ybx2	IDA		Mouse	PMID:15665108
Biological Process	GO:0048255	mRNA stabilization	Ybx2	IMP	MGI:MGI:3576937	Mouse	PMID:17035640
Biological Process	GO:0051100	negative regulation of binding	Ybx2	IMP	MGI:MGI:3576937	Mouse	PMID:17035640
Biological Process	GO:0017148	negative regulation of translation	Ybx2	IDA		Mouse	PMID:15665108
Biological Process	GO:0048599	oocyte development	Ybx2	IEP		Rat	PMID:16150897|RGD:2311249
Biological Process	GO:0048477	oogenesis	Ybx2	IMP	MGI:MGI:3576937	Mouse	PMID:15824319
Biological Process	GO:0120162	positive regulation of cold-induced thermogenesis	Ybx2	IMP		Mouse	MGI:MGI:5927671|PMID:28970281
Biological Process	GO:0007286	spermatid development	Ybx2	IMP	MGI:MGI:3576937	Mouse	PMID:15824319
Biological Process	GO:0007286	spermatid development	Ybx2	IMP	MGI:MGI:3576937	Mouse	PMID:17035640

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern