Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes XAB2
  • Mouse genes Xab2
  • Rat genes Xab2
  • Zfish genes xab2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Xab2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:P23025	Human	PMID:10944529
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:P24928	Human	PMID:10944529
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q03468	Human	PMID:10944529
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q13216	Human	PMID:10944529
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q9UNP9	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:O60231	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q13123	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q13435	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q13573	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q9ULR0	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q9UNP9	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q9UNP9	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q9UNP9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:O60306	Human	PMID:25599396
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:P09661	Human	PMID:25599396
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:O60306	Human	PMID:28502770
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:P09661	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q9ULR0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:Q9UNP9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	XAB2	IPI	UniProtKB:P42858	Human	PMID:32814053
Cellular Component	GO:0071013	catalytic step 2 spliceosome	XAB2	IDA		Human	PMID:11991638
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	XAB2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	XAB2	HDA		Human	PMID:19946888
Cellular Component	GO:0005654	nucleoplasm	XAB2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	XAB2	IDA		Human	PMID:28076346
Cellular Component	GO:0071007	U2-type catalytic step 2 spliceosome	XAB2	IDA		Human	PMID:28076346
Biological Process	GO:0001824	blastocyst development	Xab2	IMP	MGI:MGI:3574459	Mouse	PMID:15725628
Biological Process	GO:0021987	cerebral cortex development	Xab2	IEP		Rat	PMID:12801913|RGD:634609
Biological Process	GO:0006351	DNA-templated transcription	XAB2	IDA		Human	PMID:10944529
Biological Process	GO:0000398	mRNA splicing, via spliceosome	XAB2	IDA		Human	PMID:28076346
Biological Process	GO:0006283	transcription-coupled nucleotide-excision repair	XAB2	IDA		Human	PMID:10944529

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern