Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes WIPI2
  • Mouse genes Wipi2
  • Rat genes Wipi2
  • Zfish genes wipi2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Wipi2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	WIPI2	IDA		Human	PMID:20505359
Molecular Function	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	WIPI2	IDA		Human	PMID:28561066
Molecular Function	GO:0032266	phosphatidylinositol-3-phosphate binding	WIPI2	IDA		Human	PMID:20505359
Molecular Function	GO:0032266	phosphatidylinositol-3-phosphate binding	WIPI2	IDA		Human	PMID:28561066
Molecular Function	GO:0032266	phosphatidylinositol-3-phosphate binding	Wipi2	IDA		Mouse	PMID:24954904
Molecular Function	GO:0005515	protein binding	WIPI2	IPI	UniProtKB:Q9NUX5	Human	PMID:21044950
Molecular Function	GO:0005515	protein binding	WIPI2	IPI	UniProtKB:Q7Z6L1	Human	PMID:21575909
Molecular Function	GO:0005515	protein binding	WIPI2	IPI	UniProtKB:Q15041	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	WIPI2	IPI	UniProtKB:Q9UI14	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	WIPI2	IPI	UniProtKB:Q5MNZ9	Human	PMID:28561066
Molecular Function	GO:0005515	protein binding	WIPI2	IPI	UniProtKB:Q676U5	Human	PMID:28561066
Molecular Function	GO:0005515	protein binding	WIPI2	IPI	UniProtKB:Q9Y484	Human	PMID:28561066
Molecular Function	GO:0005515	protein binding	WIPI2	IPI	UniProtKB:O75385	Human	PMID:28890335
Molecular Function	GO:0005515	protein binding	WIPI2	IPI	UniProtKB:O75385,UniProtKB:Q8TDY2	Human	PMID:28890335
Molecular Function	GO:0005515	protein binding	WIPI2	IPI	UniProtKB:Q8TDY2	Human	PMID:28890335
Molecular Function	GO:0005515	protein binding	Wipi2	IPI	PR:Q8C0J2	Mouse	PMID:24954904
Cellular Component	GO:0005776	autophagosome	Wipi2	IDA		Mouse	PMID:24954904
Cellular Component	GO:0005829	cytosol	WIPI2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	WIPI2	IDA		Human	PMID:20505359
Cellular Component	GO:0016020	membrane	WIPI2	IDA		Human	PMID:25578879
Cellular Component	GO:0005654	nucleoplasm	WIPI2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000407	phagophore assembly site	WIPI2	IDA		Human	PMID:22456507
Cellular Component	GO:0000407	phagophore assembly site	WIPI2	IDA		Human	PMID:28561066
Cellular Component	GO:0000407	phagophore assembly site	WIPI2	IDA		Human	PMID:33499712
Cellular Component	GO:0000407	phagophore assembly site	Wipi2	IDA		Mouse	PMID:24954904
Cellular Component	GO:0034045	phagophore assembly site membrane	WIPI2	IDA		Human	PMID:20505359
Cellular Component	GO:0032991	protein-containing complex	WIPI2	IDA		Human	GO_REF:0000054
Biological Process	GO:0000045	autophagosome assembly	WIPI2	IMP		Human	PMID:20505359
Biological Process	GO:0000045	autophagosome assembly	WIPI2	IMP		Human	PMID:28561066
Biological Process	GO:0000045	autophagosome assembly	WIPI2	IDA		Human	PMID:28890335
Biological Process	GO:0009267	cellular response to starvation	WIPI2	IDA		Human	PMID:28561066
Biological Process	GO:0061739	protein lipidation involved in autophagosome assembly	Wipi2	IDA		Mouse	PMID:24954904
Biological Process	GO:0034497	protein localization to phagophore assembly site	WIPI2	IMP		Human	PMID:28561066
Biological Process	GO:0034497	protein localization to phagophore assembly site	Wipi2	IPI	PR:Q8C0J2	Mouse	PMID:24954904
Biological Process	GO:0098792	xenophagy	Wipi2	IPI	PR:Q8C0J2	Mouse	PMID:24954904

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern