Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VPS26B
  • Mouse genes Vps26b
  • Rat genes Vps26b
  • Zfish genes vps26b,vps26bl
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vps26b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	VPS26B	IPI	UniProtKB:Q96QK1	Human	PMID:24980502
Molecular Function	GO:0005515	protein binding	VPS26B	IPI	UniProtKB:Q96QK1	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	VPS26B	IPI	UniProtKB:Q96QK1	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	VPS26B	IPI	UniProtKB:Q8TAT6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VPS26B	IPI	UniProtKB:Q96QK1	Human	PMID:32296183
Cellular Component	GO:0005769	early endosome	Vps26b	IDA		Mouse	MGI:MGI:5607223|PMID:21920005
Cellular Component	GO:0005770	late endosome	Vps26b	IDA		Mouse	MGI:MGI:5607223|PMID:21920005
Cellular Component	GO:0045335	phagocytic vesicle	Vps26b	IDA		Mouse	PMID:19144319
Cellular Component	GO:0030904	retromer complex	Vps26b	IDA		Mouse	MGI:MGI:4867115|PMID:21040701
Biological Process	GO:0071346	cellular response to type II interferon	Vps26b	IDA		Mouse	PMID:19144319
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	Vps26b	IMP		Mouse	MGI:MGI:5607223|PMID:21920005

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern