Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes USP6NL
  • Mouse genes Usp6nl
  • Rat genes Usp6nl
  • Zfish genes usp6nl
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Usp6nl

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005096	GTPase activator activity	USP6NL	IDA		Human	PMID:17562788
Molecular Function	GO:0005096	GTPase activator activity	USP6NL	IDA		Human	PMID:17684057
Molecular Function	GO:0031267	small GTPase binding	USP6NL	IPI	UniProtKB:Q86YS6	Human	PMID:17562788
Cellular Component	GO:0031410	cytoplasmic vesicle	USP6NL	IDA		Human	PMID:17684057
Cellular Component	GO:0005886	plasma membrane	USP6NL	IDA		Human	PMID:17562788
Biological Process	GO:0007030	Golgi organization	USP6NL	IMP		Human	PMID:17684057
Biological Process	GO:0007030	Golgi organization	USP6NL	IMP		Human	PMID:21680502
Biological Process	GO:0048227	plasma membrane to endosome transport	USP6NL	IMP		Human	PMID:17562788
Biological Process	GO:0043547	positive regulation of GTPase activity	USP6NL	IDA		Human	PMID:17562788
Biological Process	GO:1903358	regulation of Golgi organization	USP6NL	IMP		Human	PMID:17562788
Biological Process	GO:0035526	retrograde transport, plasma membrane to Golgi	USP6NL	IMP		Human	PMID:17684057
Biological Process	GO:0019068	virion assembly	USP6NL	IMP		Human	PMID:21680502

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern