Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UPP2
  • Mouse genes Upp2
  • Rat genes Upp2
  • Zfish genes upp2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Upp2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0047847	deoxyuridine phosphorylase activity	UPP2	IDA		Human	PMID:12849978
Molecular Function	GO:0042802	identical protein binding	UPP2	IPI	UniProtKB:O95045	Human	PMID:21855639
Molecular Function	GO:0042802	identical protein binding	UPP2	IPI	UniProtKB:O95045	Human	PMID:25416956
Molecular Function	GO:0042802	identical protein binding	UPP2	IPI	UniProtKB:O95045	Human	PMID:29892012
Molecular Function	GO:0042802	identical protein binding	UPP2	IPI	UniProtKB:O95045	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	UPP2	IPI	UniProtKB:Q8IUQ4	Human	PMID:25416956
Molecular Function	GO:0004850	uridine phosphorylase activity	UPP2	IDA		Human	PMID:12849978
Molecular Function	GO:0004850	uridine phosphorylase activity	UPP2	IDA		Human	PMID:21855639
Molecular Function	GO:0004850	uridine phosphorylase activity	Upp2	IDA		Mouse	PMID:14715930
Molecular Function	GO:0004850	uridine phosphorylase activity	Upp2	IDA		Mouse	PMID:21855639
Cellular Component	GO:0005829	cytosol	Upp2	IDA		Mouse	PMID:14715930
Cellular Component	GO:0045098	type III intermediate filament	UPP2	IDA		Human	PMID:11278417
Biological Process	GO:0006248	CMP catabolic process	Upp2	IDA		Mouse	PMID:14715930
Biological Process	GO:0006249	dCMP catabolic process	UPP2	IDA		Human	PMID:12849978
Biological Process	GO:0046050	UMP catabolic process	Upp2	IDA		Mouse	PMID:14715930
Biological Process	GO:0006218	uridine catabolic process	UPP2	IDA		Human	PMID:12849978
Biological Process	GO:0006218	uridine catabolic process	UPP2	IDA		Human	PMID:21855639
Biological Process	GO:0006218	uridine catabolic process	Upp2	IDA		Mouse	MGI:MGI:2683856|PMID:14715930

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern