Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UMPS
  • Mouse genes Umps
  • Rat genes Umps
  • Zfish genes umps
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Umps

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004588	orotate phosphoribosyltransferase activity	UMPS	IDA		Human	PMID:11730338
Molecular Function	GO:0004588	orotate phosphoribosyltransferase activity	UMPS	IDA		Human	PMID:6893554
Molecular Function	GO:0004588	orotate phosphoribosyltransferase activity	UMPS	IDA		Human	PMID:9042911
Molecular Function	GO:0004588	orotate phosphoribosyltransferase activity	Umps	IDA		Mouse	PMID:965379
Molecular Function	GO:0004588	orotate phosphoribosyltransferase activity	Umps	IDA		Rat	PMID:6134725|RGD:5132277
Molecular Function	GO:0004590	orotidine-5'-phosphate decarboxylase activity	UMPS	IDA		Human	PMID:11730338
Molecular Function	GO:0004590	orotidine-5'-phosphate decarboxylase activity	UMPS	IDA		Human	PMID:18184586
Molecular Function	GO:0004590	orotidine-5'-phosphate decarboxylase activity	UMPS	IDA		Human	PMID:6893554
Molecular Function	GO:0004590	orotidine-5'-phosphate decarboxylase activity	UMPS	IDA		Human	PMID:9042911
Molecular Function	GO:0004590	orotidine-5'-phosphate decarboxylase activity	Umps	IDA		Mouse	PMID:2419341
Molecular Function	GO:0004590	orotidine-5'-phosphate decarboxylase activity	Umps	IDA		Mouse	PMID:965379
Molecular Function	GO:0004590	orotidine-5'-phosphate decarboxylase activity	Umps	IDA		Mouse	PMID:3308878
Molecular Function	GO:0004590	orotidine-5'-phosphate decarboxylase activity	Umps	IDA		Rat	PMID:6134725|RGD:5132277
Cellular Component	GO:0005737	cytoplasm	UMPS	IDA		Human	PMID:15890648
Cellular Component	GO:0005634	nucleus	UMPS	IDA		Human	PMID:15890648
Biological Process	GO:0044205	'de novo' UMP biosynthetic process	Umps	IMP		Mouse	PMID:6154574
Biological Process	GO:0044205	'de novo' UMP biosynthetic process	Umps	IDA		Mouse	PMID:2419341
Biological Process	GO:0071466	cellular response to xenobiotic stimulus	Umps	IEP		Rat	PMID:6134725|RGD:5132277
Biological Process	GO:0007565	female pregnancy	Umps	IEP		Rat	PMID:1476792|RGD:5132591
Biological Process	GO:0007595	lactation	Umps	IEP		Rat	PMID:1476792|RGD:5132591
Biological Process	GO:0006225	UDP biosynthetic process	Umps	IMP		Mouse	PMID:6154574
Biological Process	GO:0006225	UDP biosynthetic process	Umps	IDA		Mouse	PMID:2419341
Biological Process	GO:0006222	UMP biosynthetic process	UMPS	IDA		Human	PMID:11730338
Biological Process	GO:0006222	UMP biosynthetic process	UMPS	IDA		Human	PMID:18184586
Biological Process	GO:0006222	UMP biosynthetic process	UMPS	IDA		Human	PMID:6893554
Biological Process	GO:0006222	UMP biosynthetic process	UMPS	IDA		Human	PMID:9042911
Biological Process	GO:0006222	UMP biosynthetic process	Umps	IDA		Rat	PMID:6134725|RGD:5132277

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern