Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UCMA
  • Mouse genes Ucma
  • Rat genes Ucma
  • Zfish genes ucmaa,ucmab
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ucma

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0036122	BMP binding	UCMA	IDA		Human	PMID:29563538
Molecular Function	GO:0005515	protein binding	UCMA	IPI	UniProtKB:Q9UNA0	Human	PMID:29720262
Cellular Component	GO:0005737	cytoplasm	Ucma	IDA		Mouse	PMID:29563538
Cellular Component	GO:0031012	extracellular matrix	Ucma	IDA		Mouse	PMID:18156182
Biological Process	GO:0048706	embryonic skeletal system development	ucmab	IMP	ZFIN:ZDB-MRPHLNO-111110-1	Zfish	PMID:21839171
Biological Process	GO:0048706	embryonic skeletal system development	ucmab	IMP	ZFIN:ZDB-MRPHLNO-111110-2	Zfish	PMID:21839171
Biological Process	GO:0045668	negative regulation of osteoblast differentiation	Ucma	IDA		Mouse	PMID:18156182
Biological Process	GO:0060392	negative regulation of SMAD protein signal transduction	Ucma	IMP	MGI:5314628	Mouse	PMID:29563538
Biological Process	GO:0001649	osteoblast differentiation	Ucma	IDA		Mouse	PMID:18156182

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern