Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UBXN8
  • Mouse genes Ubxn8
  • Rat genes Ubxn8
  • Zfish genes ubxn8
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ubxn8

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	UBXN8	IPI	UniProtKB:P55072	Human	PMID:18775313
Molecular Function	GO:0005515	protein binding	UBXN8	IPI	UniProtKB:P55072	Human	PMID:21949850
Molecular Function	GO:0005515	protein binding	UBXN8	IPI	UniProtKB:Q86TM6	Human	PMID:21949850
Molecular Function	GO:0005515	protein binding	UBXN8	IPI	UniProtKB:P55072	Human	PMID:29997244
Molecular Function	GO:0005515	protein binding	UBXN8	IPI	UniProtKB:O15173	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN8	IPI	UniProtKB:P48165	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN8	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN8	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN8	IPI	UniProtKB:Q7Z5P4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN8	IPI	UniProtKB:Q9NUH8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN8	IPI	UniProtKB:P14136	Human	PMID:32814053
Cellular Component	GO:0005783	endoplasmic reticulum	UBXN8	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005789	endoplasmic reticulum membrane	UBXN8	IDA		Human	PMID:21949850
Cellular Component	GO:0005730	nucleolus	UBXN8	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	UBXN8	IDA		Human	GO_REF:0000052
Biological Process	GO:0030433	ubiquitin-dependent ERAD pathway	UBXN8	IMP		Human	PMID:21949850

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern