Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UBXN6
  • Mouse genes Ubxn6
  • Rat genes Ubxn6
  • Zfish genes ubxn6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ubxn6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:P55072	Human	PMID:18656546
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:P55072	Human	PMID:18775313
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:P55072	Human	PMID:19275885
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q9BUN8	Human	PMID:19275885
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:P55072,UniProtKB:Q03135	Human	PMID:21822278
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:P49257	Human	PMID:22337587
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q15042	Human	PMID:22337587
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q9H867	Human	PMID:23349634
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q1RN33	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q9HCM9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:P55072,UniProtKB:Q5VVQ6,UniProtKB:Q9Y263	Human	PMID:27753622
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q9HCM9	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:P55072	Human	PMID:29997244
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:P43358	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q9HCM9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:P43358	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:P68543	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q14CS0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q15038	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q5VVQ6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q8NHG7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q92537	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q92567-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q96CS7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q96LJ8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:Q9HCM9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBXN6	IPI	UniProtKB:P55072	Human	PMID:32814053
Cellular Component	GO:0005737	cytoplasm	UBXN6	IDA		Human	PMID:27753622
Cellular Component	GO:0005829	cytosol	UBXN6	IDA		Human	PMID:19275885
Cellular Component	GO:0005829	cytosol	UBXN6	IDA		Human	PMID:21822278
Cellular Component	GO:0031901	early endosome membrane	UBXN6	IDA		Human	PMID:21822278
Cellular Component	GO:0005768	endosome	UBXN6	IDA		Human	PMID:26475856
Cellular Component	GO:0070062	extracellular exosome	UBXN6	HDA		Human	PMID:19056867
Cellular Component	GO:0019898	extrinsic component of membrane	UBXN6	IDA		Human	PMID:19275885
Cellular Component	GO:0031902	late endosome membrane	UBXN6	IDA		Human	PMID:21822278
Cellular Component	GO:0005765	lysosomal membrane	UBXN6	IDA		Human	PMID:21822278
Cellular Component	GO:0032991	protein-containing complex	UBXN6	IDA		Human	PMID:21822278
Biological Process	GO:0032510	endosome to lysosome transport via multivesicular body sorting pathway	UBXN6	IMP		Human	PMID:21822278
Biological Process	GO:0036503	ERAD pathway	UBXN6	IMP		Human	PMID:19275885
Biological Process	GO:0016236	macroautophagy	UBXN6	IMP		Human	PMID:27753622

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern