Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UBR4
  • Mouse genes Ubr4
  • Rat genes Ubr4
  • Zfish genes ubr4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ubr4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	UBR4	IPI	UniProtKB:P03129	Human	PMID:16061792
Molecular Function	GO:0005515	protein binding	UBR4	IPI	UniProtKB:P04020	Human	PMID:16061792
Molecular Function	GO:0005515	protein binding	UBR4	IPI	UniProtKB:P06464	Human	PMID:16061792
Molecular Function	GO:0005515	protein binding	UBR4	IPI	UniProtKB:P03129	Human	PMID:22810586
Molecular Function	GO:0005515	protein binding	UBR4	IPI	UniProtKB:P04020	Human	PMID:22810586
Molecular Function	GO:0005515	protein binding	UBR4	IPI	UniProtKB:P06464	Human	PMID:22810586
Molecular Function	GO:0005515	protein binding	UBR4	IPI	UniProtKB:P53396	Human	PMID:23932781
Molecular Function	GO:0005515	protein binding	UBR4	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	UBR4	IPI	UniProtKB:Q93009	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	Ubr4	IPI	UniProtKB:P06933	Mouse	MGI:MGI:5508265|PMID:16081543
Molecular Function	GO:0061630	ubiquitin protein ligase activity	UBR4	IDA		Human	PMID:23932781
Cellular Component	GO:0005813	centrosome	UBR4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	UBR4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	UBR4	HDA		Human	PMID:19946888
Cellular Component	GO:0005654	nucleoplasm	UBR4	IDA		Human	GO_REF:0000052
Biological Process	GO:0045717	negative regulation of fatty acid biosynthetic process	UBR4	IDA		Human	PMID:23932781
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	UBR4	IDA		Human	PMID:23932781

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern