Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TUBA1C
  • Mouse genes Tuba1c
  • Rat genes Tuba1c
  • Zfish genes tuba1b,tuba1c
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tuba1c

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TUBA1C	IPI	UniProtKB:Q8IWS0	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	TUBA1C	IPI	UniProtKB:P0DOE7	Human	PMID:25556234
Molecular Function	GO:0005515	protein binding	TUBA1C	IPI	UniProtKB:P08670	Human	PMID:27107012
Molecular Function	GO:0005515	protein binding	TUBA1C	IPI	UniProtKB:P13693	Human	PMID:27607350
Molecular Function	GO:0005515	protein binding	TUBA1C	IPI	UniProtKB:O75400-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TUBA1C	IPI	UniProtKB:P13473-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TUBA1C	IPI	UniProtKB:Q9Y371	Human	PMID:32814053
Cellular Component	GO:0005881	cytoplasmic microtubule	Tuba1c	IDA		Mouse	PMID:19103752
Cellular Component	GO:0045121	membrane raft	Tuba1c	IDA		Rat	PMID:14499952|RGD:12793007
Cellular Component	GO:0015630	microtubule cytoskeleton	TUBA1C	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TUBA1C	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	TUBA1C	IDA		Human	PMID:22720776
Cellular Component	GO:0031982	vesicle	TUBA1C	HDA		Human	PMID:19190083

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern