Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIOBP
  • Mouse genes Triobp
  • Rat genes Triobp
  • Zfish genes triobpa,triobpb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Triobp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051015	actin filament binding	TRIOBP	IDA		Human	PMID:11148140
Molecular Function	GO:0005515	protein binding	Triobp	IPI	PR:Q0ZLH2	Mouse	PMID:28209736
Molecular Function	GO:0031625	ubiquitin protein ligase binding	TRIOBP	IPI	UniProtKB:Q5T447	Human	PMID:18194665
Cellular Component	GO:0015629	actin cytoskeleton	TRIOBP	IDA		Human	PMID:11148140
Cellular Component	GO:0005925	focal adhesion	TRIOBP	HDA		Human	PMID:21423176
Cellular Component	GO:0120044	stereocilium base	Triobp	IDA		Mouse	PMID:28209736
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Triobp	IMP	MGI:MGI:4881773	Mouse	PMID:20510926
Biological Process	GO:1900026	positive regulation of substrate adhesion-dependent cell spreading	TRIOBP	IDA		Human	PMID:11148140
Biological Process	GO:1900026	positive regulation of substrate adhesion-dependent cell spreading	Triobp	IDA		Mouse	PMID:11148140
Biological Process	GO:0007605	sensory perception of sound	Triobp	IMP	MGI:MGI:4881773	Mouse	PMID:20510926

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern