Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIM69
  • Mouse genes Trim69
  • Rat genes Trim69
  • Zfish genes trim105,trim69
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trim69

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:P43358	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:P43358	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:P05496	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:P08243	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:P68106	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q04695	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q12874	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q15637	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q1RN33	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q659C4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q6NYC8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q6P088	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q6P9E2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q6PHW0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q86SG6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q86TH3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q8N205	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q96CS2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q96DX7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q9BQ89	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:Q9UHP6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:P05496	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:P08243	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	TRIM69	IPI	UniProtKB:P43358	Human	PMID:31515488
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	TRIM69	IDA		Human	PMID:23131556
Cellular Component	GO:0005737	cytoplasm	TRIM69	IDA		Human	PMID:23131556
Cellular Component	GO:0016607	nuclear speck	TRIM69	IDA		Human	PMID:23131556
Cellular Component	GO:0005634	nucleus	TRIM69	IDA		Human	PMID:23131556
Biological Process	GO:0007420	brain development	trim69	IMP	ZFIN:ZDB-MRPHLNO-160728-3	Zfish	PMID:27050765
Biological Process	GO:0007420	brain development	trim69	IGI	ZFIN:ZDB-MRPHLNO-080908-1,ZFIN:ZDB-MRPHLNO-160728-3	Zfish	PMID:27050765
Biological Process	GO:0042981	regulation of apoptotic process	trim69	IMP	ZFIN:ZDB-MRPHLNO-160728-3	Zfish	PMID:27031046

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern