Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRAPPC2
  • Mouse genes Trappc2
  • Rat genes Trappc2
  • Zfish genes trappc2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trappc2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRAPPC2	IPI	UniProtKB:O43617,UniProtKB:P48553,UniProtKB:Q7Z392,UniProtKB:Q8WVT3,UniProtKB:Q9UL33,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC2	IPI	UniProtKB:O43617,UniProtKB:Q7Z392,UniProtKB:Q8WVT3,UniProtKB:Q9UL33	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC2	IPI	UniProtKB:P48553,UniProtKB:Q7Z392,UniProtKB:Q8WVT3,UniProtKB:Q96Q05,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC2	IPI	UniProtKB:Q5T215	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC2	IPI	UniProtKB:Q9UL33	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC2	IPI	UniProtKB:Q719H9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRAPPC2	IPI	UniProtKB:Q8IWZ5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRAPPC2	IPI	UniProtKB:Q9UBC2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRAPPC2	IPI	UniProtKB:Q02224	Human	PMID:25918224
Molecular Function	GO:0005515	protein binding	Trappc2	IPI	UniProtKB:Q96Q05	Mouse	MGI:MGI:6202000|PMID:21858081
Molecular Function	GO:0005515	protein binding	Trappc2	IPI	UniProtKB:Q8K3V1	Mouse	MGI:MGI:5512943|PMID:21827752
Molecular Function	GO:0005515	protein binding	Trappc2	IPI	PR:O55013	Mouse	PMID:17027922
Molecular Function	GO:0044325	transmembrane transporter binding	TRAPPC2	IPI	UniProtKB:O00299	Human	PMID:12681486
Molecular Function	GO:0044325	transmembrane transporter binding	TRAPPC2	IPI	UniProtKB:O15247	Human	PMID:12681486
Cellular Component	GO:0005783	endoplasmic reticulum	TRAPPC2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	TRAPPC2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TRAPPC2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TRAPPC2	IDA		Human	PMID:25918224
Cellular Component	GO:0048471	perinuclear region of cytoplasm	TRAPPC2	IDA		Human	PMID:12681486
Cellular Component	GO:0030008	TRAPP complex	TRAPPC2	IDA		Human	PMID:21525244
Cellular Component	GO:0030008	TRAPP complex	Trappc2	IDA		Mouse	PMID:17027922
Biological Process	GO:0001501	skeletal system development	TRAPPC2	IMP		Human	PMID:10431248

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern