Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRAPPC11
  • Mouse genes Trappc11
  • Rat genes Trappc11
  • Zfish genes trappc11
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trappc11

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRAPPC11	IPI	UniProtKB:O43617,UniProtKB:P0DI81,UniProtKB:P48553,UniProtKB:Q8WVT3,UniProtKB:Q9UL33,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC11	IPI	UniProtKB:O43617,UniProtKB:P0DI81,UniProtKB:Q8WVT3,UniProtKB:Q9UL33	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC11	IPI	UniProtKB:P0DI81,UniProtKB:P48553,UniProtKB:Q8WVT3,UniProtKB:Q96Q05,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC11	IPI	UniProtKB:P48553,UniProtKB:Q8WVT3	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC11	IPI	UniProtKB:P48553,UniProtKB:Q8WVT3,UniProtKB:Q96Q05,UniProtKB:Q9UL33,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC11	IPI	UniProtKB:Q5T215	Human	PMID:21525244
Cellular Component	GO:0005794	Golgi apparatus	TRAPPC11	IDA		Human	PMID:27862579
Cellular Component	GO:0030008	TRAPP complex	TRAPPC11	IMP		Human	PMID:21525244
Biological Process	GO:0045054	constitutive secretory pathway	TRAPPC11	IMP		Human	PMID:19942856
Biological Process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	TRAPPC11	IMP		Human	PMID:21525244
Biological Process	GO:0007030	Golgi organization	TRAPPC11	IMP		Human	PMID:21525244
Biological Process	GO:0007030	Golgi organization	trappc11	IMP	ZFIN:ZDB-GENO-161201-8	Zfish	PMID:26912795
Biological Process	GO:0055088	lipid homeostasis	trappc11	IGI	ZFIN:ZDB-GENE-060503-338,ZFIN:ZDB-GENO-111222-39	Zfish	PMID:28027591
Biological Process	GO:0001889	liver development	trappc11	IMP	ZFIN:ZDB-GENO-040726-2	Zfish	PMID:21538441
Biological Process	GO:0006487	protein N-linked glycosylation	trappc11	IMP	ZFIN:ZDB-GENO-161201-8	Zfish	PMID:26912795
Biological Process	GO:0009306	protein secretion	trappc11	IMP	ZFIN:ZDB-GENO-161201-8	Zfish	PMID:26912795
Biological Process	GO:0061635	regulation of protein complex stability	TRAPPC11	IMP		Human	PMID:21525244
Biological Process	GO:1905897	regulation of response to endoplasmic reticulum stress	trappc11	IGI	ZFIN:ZDB-GENE-060503-338,ZFIN:ZDB-GENO-111222-39	Zfish	PMID:28027591
Biological Process	GO:0060041	retina development in camera-type eye	trappc11	IMP	ZFIN:ZDB-GENO-040726-2	Zfish	PMID:15716491

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern