Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TOGARAM1
  • Mouse genes Togaram1
  • Rat genes Togaram1
  • Zfish genes togaram1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Togaram1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TOGARAM1	IPI	UniProtKB:A2RUB6	Human	PMID:32453716
Molecular Function	GO:0005515	protein binding	TOGARAM1	IPI	UniProtKB:O60308	Human	PMID:32453716
Molecular Function	GO:0005515	protein binding	TOGARAM1	IPI	UniProtKB:Q1MSJ5	Human	PMID:32453716
Molecular Function	GO:0005515	protein binding	TOGARAM1	IPI	UniProtKB:Q7Z3E5	Human	PMID:32453716
Cellular Component	GO:0005930	axoneme	TOGARAM1	IDA		Human	PMID:32453716
Cellular Component	GO:0036064	ciliary basal body	Togaram1	IDA		Mouse	MGI:MGI:5796072|PMID:26378256
Cellular Component	GO:0005929	cilium	Togaram1	IDA		Mouse	MGI:MGI:5796072|PMID:26378256
Cellular Component	GO:0005874	microtubule	Togaram1	IDA		Mouse	MGI:MGI:5796072|PMID:26378256
Biological Process	GO:0060271	cilium assembly	TOGARAM1	IMP		Human	PMID:32453716
Biological Process	GO:0060271	cilium assembly	togaram1	IMP	ZFIN:ZDB-GENO-211027-3	Zfish	PMID:32453716
Biological Process	GO:0060271	cilium assembly	togaram1	IMP	ZFIN:ZDB-GENO-211027-2	Zfish	PMID:32453716
Biological Process	GO:0060271	cilium assembly	togaram1	IMP	ZFIN:ZDB-GENO-211027-1	Zfish	PMID:32453716
Biological Process	GO:0031116	positive regulation of microtubule polymerization	Togaram1	IDA		Mouse	MGI:MGI:5796072|PMID:26378256

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern