Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNS1
  • Mouse genes Tns1
  • Rat genes Tns1
  • Zfish genes tns1a,tns1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tns1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TNS1	IPI	UniProtKB:Q96QB1	Human	PMID:17190795
Molecular Function	GO:0005515	protein binding	TNS1	IPI	UniProtKB:P08581	Human	PMID:24728074
Molecular Function	GO:0005515	protein binding	TNS1	IPI	UniProtKB:P10275	Human	PMID:24728074
Molecular Function	GO:0005515	protein binding	TNS1	IPI	UniProtKB:P10721	Human	PMID:24728074
Molecular Function	GO:0003723	RNA binding	TNS1	HDA		Human	PMID:22658674
Cellular Component	GO:0030055	cell-substrate junction	Tns1	IDA		Mouse	PMID:9087448
Cellular Component	GO:0005925	focal adhesion	TNS1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005925	focal adhesion	TNS1	IDA		Human	PMID:11023826
Cellular Component	GO:0005925	focal adhesion	TNS1	HDA		Human	PMID:21423176
Cellular Component	GO:0005925	focal adhesion	Tns1	IDA		Mouse	PMID:9087448
Biological Process	GO:0007044	cell-substrate junction assembly	Tns1	IMP	MGI:MGI:2447792	Mouse	PMID:9087448
Biological Process	GO:0010761	fibroblast migration	Tns1	IMP	MGI:MGI:2447792	Mouse	PMID:11792844

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern