Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNFRSF9
  • Mouse genes Tnfrsf9
  • Rat genes Tnfrsf9
  • Zfish genes tnfrsf9a,tnfrsf9b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tnfrsf9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TNFRSF9	IPI	UniProtKB:Q9Y6X1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Tnfrsf9	IPI	UniProtKB:Q12933	Mouse	MGI:MGI:1345765|PMID:10518213
Molecular Function	GO:0005515	protein binding	Tnfrsf9	IPI	UniProtKB:Q12933	Mouse	MGI:MGI:1101440|PMID:9418902
Molecular Function	GO:0038023	signaling receptor activity	Tnfrsf9	IPI	PR:P41274	Mouse	PMID:8405064
Biological Process	GO:0033084	regulation of immature T cell proliferation in thymus	Tnfrsf9	IDA		Mouse	PMID:8405064

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern