Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNFRSF19
  • Mouse genes Tnfrsf19
  • Rat genes Tnfrsf19
  • Zfish genes tnfrsf19
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tnfrsf19

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TNFRSF19	IPI	UniProtKB:P30086	Human	PMID:30337686
Molecular Function	GO:0005515	protein binding	TNFRSF19	IPI	UniProtKB:P35232	Human	PMID:30337686
Molecular Function	GO:0005515	protein binding	TNFRSF19	IPI	UniProtKB:P52565	Human	PMID:30337686
Molecular Function	GO:0005515	protein binding	Tnfrsf19	IPI	UniProtKB:P30086|UniProtKB:P35232	Mouse	MGI:MGI:6274967|PMID:30337686
Molecular Function	GO:0005515	protein binding	tnfrsf19	IPI	ZFIN:ZDB-GENE-070606-2	Zfish	PMID:24466042
Biological Process	GO:0014045	establishment of endothelial blood-brain barrier	tnfrsf19	IMP	ZFIN:ZDB-MRPHLNO-120302-4	Zfish	PMID:22340501
Biological Process	GO:0014045	establishment of endothelial blood-brain barrier	tnfrsf19	IGI	ZFIN:ZDB-MRPHLNO-120302-1,ZFIN:ZDB-MRPHLNO-120302-4	Zfish	PMID:22340501
Biological Process	GO:0001942	hair follicle development	Tnfrsf19	IGI	MGI:MGI:1195272	Mouse	PMID:18689798
Biological Process	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	Tnfrsf19	IDA		Mouse	PMID:10764796
Biological Process	GO:0048916	posterior lateral line development	tnfrsf19	IMP	ZFIN:ZDB-MRPHLNO-140522-4	Zfish	PMID:24466042
Biological Process	GO:0048922	posterior lateral line neuromast deposition	tnfrsf19	IMP	ZFIN:ZDB-MRPHLNO-140522-4	Zfish	PMID:24466042
Biological Process	GO:0002040	sprouting angiogenesis	tnfrsf19	IMP	ZFIN:ZDB-MRPHLNO-120302-4	Zfish	PMID:22340501
Biological Process	GO:0002040	sprouting angiogenesis	tnfrsf19	IGI	ZFIN:ZDB-MRPHLNO-120302-1,ZFIN:ZDB-MRPHLNO-120302-4	Zfish	PMID:22340501

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern