Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNFRSF18
  • Mouse genes Tnfrsf18
  • Rat genes Tnfrsf18
  • Zfish genes tnfrsf18
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tnfrsf18

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TNFRSF18	IPI	UniProtKB:Q9UNG2	Human	PMID:18040044
Molecular Function	GO:0005515	protein binding	TNFRSF18	IPI	UniProtKB:Q9UNG2	Human	PMID:18378892
Molecular Function	GO:0005515	protein binding	Tnfrsf18	IPI	UniProtKB:Q7TS55	Mouse	MGI:MGI:3690151|PMID:14647196
Molecular Function	GO:0005515	protein binding	Tnfrsf18	IPI	UniProtKB:Q7TS55	Mouse	MGI:MGI:3772964|PMID:18182486
Molecular Function	GO:0005515	protein binding	Tnfrsf18	IPI	UniProtKB:O54926	Mouse	MGI:MGI:3696501|PMID:12478477
Cellular Component	GO:0009897	external side of plasma membrane	Tnfrsf18	IDA		Mouse	PMID:16227984
Cellular Component	GO:0009897	external side of plasma membrane	Tnfrsf18	IDA		Mouse	PMID:16769892
Biological Process	GO:0045785	positive regulation of cell adhesion	TNFRSF18	IMP	UniProtKB:Q9UNG2	Human	PMID:23892569
Biological Process	GO:0045785	positive regulation of cell adhesion	Tnfrsf18	IMP	UniProtKB:Q7TS55	Mouse	MGI:MGI:5634881|PMID:23892569
Biological Process	GO:0002687	positive regulation of leukocyte migration	TNFRSF18	IMP	UniProtKB:Q9UNG2	Human	PMID:23892569
Biological Process	GO:0042531	positive regulation of tyrosine phosphorylation of STAT protein	TNFRSF18	IMP	UniProtKB:Q9UNG2	Human	PMID:23892569

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern