Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNFRSF13C
  • Mouse genes Tnfrsf13c
  • Rat genes Tnfrsf13c
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tnfrsf13c

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0009897	external side of plasma membrane	Tnfrsf13c	IDA		Mouse	PMID:15240667
Cellular Component	GO:0009897	external side of plasma membrane	Tnfrsf13c	IDA		Mouse	PMID:15368291
Biological Process	GO:0031296	B cell costimulation	Tnfrsf13c	IDA		Mouse	PMID:15240667
Biological Process	GO:0001782	B cell homeostasis	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:14557413
Biological Process	GO:0042100	B cell proliferation	Tnfrsf13c	IDA		Mouse	PMID:15240667
Biological Process	GO:0002467	germinal center formation	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:14557413
Biological Process	GO:0030890	positive regulation of B cell proliferation	Tnfrsf13c	IDA		Mouse	PMID:15240667
Biological Process	GO:0002636	positive regulation of germinal center formation	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:14557413
Biological Process	GO:0042102	positive regulation of T cell proliferation	Tnfrsf13c	IDA		Mouse	PMID:15240667
Biological Process	GO:0042102	positive regulation of T cell proliferation	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:15368291
Biological Process	GO:0042102	positive regulation of T cell proliferation	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:15240667
Biological Process	GO:0042102	positive regulation of T cell proliferation	Tnfrsf13c	IDA		Mouse	PMID:15368291
Biological Process	GO:0032729	positive regulation of type II interferon production	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:15368291
Biological Process	GO:0050776	regulation of immune response	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:15368291
Biological Process	GO:0050776	regulation of immune response	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:14557413
Biological Process	GO:0031295	T cell costimulation	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:15368291
Biological Process	GO:0031295	T cell costimulation	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:15240667
Biological Process	GO:0031295	T cell costimulation	Tnfrsf13c	IDA		Mouse	PMID:15368291
Biological Process	GO:0031295	T cell costimulation	Tnfrsf13c	IDA		Mouse	PMID:15240667
Biological Process	GO:0042098	T cell proliferation	Tnfrsf13c	IDA		Mouse	PMID:15240667
Biological Process	GO:0042098	T cell proliferation	Tnfrsf13c	IDA		Mouse	PMID:15368291
Biological Process	GO:0042098	T cell proliferation	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:15240667
Biological Process	GO:0042098	T cell proliferation	Tnfrsf13c	IMP	MGI:MGI:2389403	Mouse	PMID:15368291

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern