Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMX3
  • Mouse genes Tmx3
  • Rat genes Tmx3
  • Zfish genes tmx3a,tmx3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmx3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TMX3	IPI	UniProtKB:Q13643	Human	PMID:25416956
Molecular Function	GO:0015035	protein-disulfide reductase activity	TMX3	IDA		Human	PMID:15623505
Cellular Component	GO:0009986	cell surface	TMX3	IDA		Human	PMID:19995400
Cellular Component	GO:0009986	cell surface	Tmx3	IDA		Mouse	PMID:19995400
Cellular Component	GO:0005789	endoplasmic reticulum membrane	TMX3	IDA		Human	PMID:15623505
Biological Process	GO:0001654	eye development	tmx3a	IMP	ZFIN:ZDB-MRPHLNO-100527-10	Zfish	PMID:20485507
Biological Process	GO:0001654	eye development	tmx3a	IMP	ZFIN:ZDB-MRPHLNO-100527-9	Zfish	PMID:20485507
Biological Process	GO:0018171	peptidyl-cysteine oxidation	TMX3	IDA		Human	PMID:15623505

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern