Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMIE
  • Mouse genes Tmie
  • Rat genes Tmie
  • Zfish genes tmie
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmie

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Tmie	IPI	UniProtKB:A1Y9I9	Mouse	MGI:MGI:6100205|PMID:28504928
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	tmie	IMP	ZFIN:ZDB-GENO-190816-7	Zfish	PMID:30726219
Biological Process	GO:0048839	inner ear development	tmie	IMP	ZFIN:ZDB-GENO-100520-8	Zfish	PMID:19934034
Biological Process	GO:0042472	inner ear morphogenesis	Tmie	IMP	MGI:MGI:1857053	Mouse	PMID:12140191
Biological Process	GO:0048884	neuromast development	tmie	IMP	ZFIN:ZDB-MRPHLNO-100519-1	Zfish	PMID:19934034
Biological Process	GO:0048884	neuromast development	tmie	IMP	ZFIN:ZDB-GENO-100520-8	Zfish	PMID:19934034
Biological Process	GO:0048920	posterior lateral line neuromast primordium migration	tmie	IMP	ZFIN:ZDB-MRPHLNO-090114-1,ZFIN:ZDB-MRPHLNO-090114-2	Zfish	PMID:18330929
Biological Process	GO:0048752	semicircular canal morphogenesis	tmie	IMP	ZFIN:ZDB-MRPHLNO-090114-1,ZFIN:ZDB-MRPHLNO-090114-2	Zfish	PMID:18330929
Biological Process	GO:0007605	sensory perception of sound	Tmie	IMP	MGI:MGI:1857053	Mouse	PMID:12140191
Biological Process	GO:0007605	sensory perception of sound	tmie	IMP	ZFIN:ZDB-GENO-100520-8	Zfish	PMID:19934034

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern