Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMEM38A
  • Mouse genes Tmem38a
  • Rat genes Tmem38a
  • Zfish genes tmem38a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmem38a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	Tmem38a	IPI	PR:Q3TMP8	Mouse	PMID:17611541
Molecular Function	GO:0005267	potassium channel activity	Tmem38a	IDA		Mouse	PMID:17611541
Cellular Component	GO:0070062	extracellular exosome	TMEM38A	HDA		Human	PMID:19056867
Cellular Component	GO:0031965	nuclear membrane	Tmem38a	IDA		Mouse	PMID:17611541
Cellular Component	GO:0016529	sarcoplasmic reticulum	Tmem38a	IDA		Mouse	PMID:17611541
Biological Process	GO:0071313	cellular response to caffeine	Tmem38a	IGI	MGI:MGI:1098718	Mouse	PMID:17611541
Biological Process	GO:0007029	endoplasmic reticulum organization	Tmem38a	IGI	MGI:MGI:1098718	Mouse	PMID:17611541
Biological Process	GO:0098662	inorganic cation transmembrane transport	Tmem38a	IDA		Mouse	PMID:17611541
Biological Process	GO:0071805	potassium ion transmembrane transport	Tmem38a	IDA		Mouse	PMID:17611541
Biological Process	GO:0010881	regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion	Tmem38a	IGI	MGI:MGI:1098718	Mouse	PMID:17611541
Biological Process	GO:0014808	release of sequestered calcium ion into cytosol by sarcoplasmic reticulum	Tmem38a	IGI	MGI:MGI:1098718	Mouse	PMID:17611541

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern