Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TECTA
  • Mouse genes Tecta
  • Rat genes Tecta
  • Zfish genes tecta
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tecta

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005201	extracellular matrix structural constituent	Tecta	IDA		Mouse	PMID:9079715
Molecular Function	GO:0005515	protein binding	Tecta	IPI	UniProtKB:E9QA28	Mouse	MGI:MGI:5606235|PMID:25080593
Molecular Function	GO:0005515	protein binding	Tecta	IPI	PR:E9QA28	Mouse	PMID:21368133
Cellular Component	GO:0070062	extracellular exosome	TECTA	HDA		Human	PMID:19056867
Cellular Component	GO:0031012	extracellular matrix	Tecta	IDA		Mouse	PMID:9079715
Biological Process	GO:0048840	otolith development	tecta	IMP	ZFIN:ZDB-GENO-980202-586	Zfish	PMID:9007244
Biological Process	GO:0035889	otolith tethering	tecta	IGI	ZFIN:ZDB-GENO-150513-1	Zfish	PMID:25758224

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern