Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TCEA1
  • Mouse genes Tcea1
  • Rat genes Tcea1,Tcea1l1
  • Zfish genes tcea1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tcea1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TCEA1	IPI	UniProtKB:P24928	Human	PMID:20178742
Molecular Function	GO:0005515	protein binding	TCEA1	IPI	UniProtKB:Q8N7H5	Human	PMID:20178742
Molecular Function	GO:0005515	protein binding	TCEA1	IPI	UniProtKB:Q8WVC0	Human	PMID:20178742
Molecular Function	GO:0005515	protein binding	TCEA1	IPI	UniProtKB:P24928	Human	PMID:20562857
Molecular Function	GO:0005515	protein binding	TCEA1	IPI	UniProtKB:P24928	Human	PMID:23748380
Molecular Function	GO:0005515	protein binding	TCEA1	IPI	UniProtKB:Q92917	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Tcea1	IPI	PR:Q91ZD6	Mouse	PMID:12761297
Cellular Component	GO:0005730	nucleolus	TCEA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TCEA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	Tcea1	IDA		Mouse	PMID:12761297
Cellular Component	GO:0005669	transcription factor TFIID complex	TCEA1	IDA		Human	PMID:27193682
Biological Process	GO:0030218	erythrocyte differentiation	Tcea1	IMP	MGI:MGI:3622786	Mouse	PMID:16581793
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Tcea1	IDA		Mouse	PMID:12761297
Biological Process	GO:1901919	positive regulation of exoribonuclease activity	Tcea1	IDA		Rat	PMID:16046193|RGD:9693728
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Tcea1	IDA		Mouse	PMID:16581793

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern