Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TBPL2
  • Mouse genes Tbpl2
  • Rat genes Tbpl2
  • Zfish genes tbpl2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tbpl2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Tbpl2	IDA		Mouse	PMID:17109819
Molecular Function	GO:0003677	DNA binding	tbpl2	IDA		Zfish	PMID:18046332|ZFIN:ZDB-PUB-071210-9
Molecular Function	GO:0003677	DNA binding	tbpl2	IDA		Zfish	PMID:15062100
Molecular Function	GO:0005515	protein binding	Tbpl2	IPI	UniProtKB:Q5HZG4	Mouse	MGI:MGI:3773769|PMID:17704303
Molecular Function	GO:0000976	transcription cis-regulatory region binding	tbpl2	IPI	ZFIN:ZDB-GENE-030131-6406	Zfish	PMID:19777587
Cellular Component	GO:0005737	cytoplasm	TBPL2	IDA		Human	PMID:14634207
Cellular Component	GO:0005737	cytoplasm	Tbpl2	IDA		Mouse	PMID:17109819
Cellular Component	GO:0001674	female germ cell nucleus	Tbpl2	IDA		Mouse	PMID:17641088
Cellular Component	GO:0005634	nucleus	TBPL2	IDA		Human	PMID:14634207
Cellular Component	GO:0005634	nucleus	Tbpl2	IDA		Mouse	PMID:17109819
Biological Process	GO:0006352	DNA-templated transcription initiation	tbpl2	IDA		Zfish	PMID:15062100
Biological Process	GO:0009792	embryo development ending in birth or egg hatching	tbpl2	IMP		Zfish	PMID:18046332|ZFIN:ZDB-PUB-071210-9
Biological Process	GO:0009880	embryonic pattern specification	tbpl2	IMP		Zfish	PMID:15062100|ZFIN:ZDB-PUB-040408-6
Biological Process	GO:0030097	hemopoiesis	tbpl2	IMP		Zfish	PMID:18046332|ZFIN:ZDB-PUB-071210-9
Biological Process	GO:0030097	hemopoiesis	tbpl2	IMP	ZFIN:ZDB-MRPHLNO-080303-1	Zfish	PMID:19777587

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern