Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TANC1
  • Mouse genes Tanc1
  • Rat genes Tanc1
  • Zfish genes tanc1a,tanc1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tanc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TANC1	IPI	UniProtKB:Q12959	Human	PMID:30126976
Molecular Function	GO:0005515	protein binding	TANC1	IPI	UniProtKB:Q14160	Human	PMID:30126976
Molecular Function	GO:0005515	protein binding	Tanc1	IPI	UniProtKB:Q9UKE5	Rat	PMID:18930710|RGD:8553405
Cellular Component	GO:0043679	axon terminus	Tanc1	IDA		Mouse	PMID:21068316
Cellular Component	GO:0030425	dendrite	Tanc1	IDA		Mouse	PMID:21068316
Cellular Component	GO:0098978	glutamatergic synapse	Tanc1	IDA		Rat	PMID:21068316|RGD:11353167
Cellular Component	GO:0098978	glutamatergic synapse	Tanc1	IMP		Rat	PMID:21068316|RGD:11353167
Cellular Component	GO:0043025	neuronal cell body	Tanc1	IDA		Mouse	PMID:21068316
Cellular Component	GO:0099092	postsynaptic density, intracellular component	Tanc1	IDA		Rat	PMID:21068316|RGD:11353167
Cellular Component	GO:0099092	postsynaptic density, intracellular component	Tanc1	IMP		Rat	PMID:21068316|RGD:11353167
Biological Process	GO:0097062	dendritic spine maintenance	Tanc1	IMP	MGI:MGI:4125076	Mouse	PMID:21068316
Biological Process	GO:0007520	myoblast fusion	Tanc1	IMP		Mouse	PMID:22182840
Biological Process	GO:0099175	regulation of postsynapse organization	Tanc1	IDA		Rat	PMID:21068316|RGD:11353167
Biological Process	GO:0099175	regulation of postsynapse organization	Tanc1	IMP		Rat	PMID:21068316|RGD:11353167
Biological Process	GO:0008542	visual learning	Tanc1	IMP	MGI:MGI:4125076	Mouse	PMID:21068316

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern