Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYNJ2BP
  • Mouse genes Synj2bp
  • Rat genes Synj2bp
  • Zfish genes synj2bp
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Synj2bp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:O00548	Human	PMID:24025447
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q9NR61	Human	PMID:24025447
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q8N6Y0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:A1L3X0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:P11912	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:P49447	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q15125	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q3KNW5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q5VYS4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q7Z7G2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q8N1Q8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q8N6Y0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q8TAF8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q96BA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q96IK0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q96KR6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q96MV1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q9H6H4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q9NUH8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q9NWH2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q9NYP7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q9UHI5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNJ2BP	IPI	UniProtKB:Q9Y282	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Synj2bp	IPI	UniProtKB:A2ARV4	Mouse	MGI:MGI:3687813|PMID:10827173
Molecular Function	GO:0005515	protein binding	Synj2bp	IPI	PR:P27040	Mouse	PMID:11882656
Molecular Function	GO:0005515	protein binding	Synj2bp	IPI	RGD:728898	Rat	PMID:10357812|RGD:69391
Molecular Function	GO:0005515	protein binding	Synj2bp	IPI	UniProtKB:O55207-3	Rat	PMID:10357812|RGD:69391
Molecular Function	GO:0070699	type II activin receptor binding	Synj2bp	IPI	UniProtKB:P27038|UniProtKB:P27038|UniProtKB:P27038	Mouse	MGI:MGI:3623710|PMID:16648306
Cellular Component	GO:0009986	cell surface	Synj2bp	IDA		Mouse	MGI:MGI:3623710|PMID:16648306
Cellular Component	GO:0005741	mitochondrial outer membrane	SYNJ2BP	IDA		Human	PMID:32973005
Cellular Component	GO:0005741	mitochondrial outer membrane	Synj2bp	IDA		Rat	PMID:10357812|RGD:69391
Cellular Component	GO:0005739	mitochondrion	SYNJ2BP	IDA		Human	PMID:18845145
Biological Process	GO:0048312	intracellular distribution of mitochondria	Synj2bp	IDA		Rat	PMID:10357812|RGD:69391
Biological Process	GO:0032926	negative regulation of activin receptor signaling pathway	Synj2bp	IDA		Mouse	MGI:MGI:3623710|PMID:16648306
Biological Process	GO:0016525	negative regulation of angiogenesis	SYNJ2BP	IMP		Human	PMID:24025447
Biological Process	GO:0010596	negative regulation of endothelial cell migration	SYNJ2BP	IMP		Human	PMID:24025447
Biological Process	GO:0001937	negative regulation of endothelial cell proliferation	SYNJ2BP	IMP		Human	PMID:24025447
Biological Process	GO:0070373	negative regulation of ERK1 and ERK2 cascade	SYNJ2BP	IDA		Human	PMID:24025447
Biological Process	GO:1903671	negative regulation of sprouting angiogenesis	SYNJ2BP	IMP		Human	PMID:24025447
Biological Process	GO:0032927	positive regulation of activin receptor signaling pathway	Synj2bp	IDA		Mouse	MGI:MGI:3623710|PMID:16648306
Biological Process	GO:2000010	positive regulation of protein localization to cell surface	Synj2bp	IDA		Mouse	MGI:MGI:3623710|PMID:16648306
Biological Process	GO:0002092	positive regulation of receptor internalization	Synj2bp	IDA		Mouse	MGI:MGI:3623710|PMID:16648306
Biological Process	GO:0006605	protein targeting	Synj2bp	IDA		Mouse	PMID:11882656
Biological Process	GO:0030100	regulation of endocytosis	Synj2bp	IDA		Mouse	PMID:11882656
Biological Process	GO:0008593	regulation of Notch signaling pathway	SYNJ2BP	IMP		Human	PMID:24025447
Biological Process	GO:0007266	Rho protein signal transduction	Synj2bp	IDA		Mouse	PMID:11882656

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern