Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYNC
  • Mouse genes Sync
  • Rat genes Sync
  • Zfish genes sync
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sync

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SYNC	IPI	UniProtKB:O60333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNC	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNC	IPI	UniProtKB:P07196	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNC	IPI	UniProtKB:P08670	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNC	IPI	UniProtKB:P13637	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNC	IPI	UniProtKB:P14136	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNC	IPI	UniProtKB:P16284	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNC	IPI	UniProtKB:P20339	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNC	IPI	UniProtKB:P68133	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNC	IPI	UniProtKB:Q13393	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Sync	IPI	UniProtKB:P15331	Mouse	MGI:MGI:6764959|PMID:20587592
Molecular Function	GO:0005515	protein binding	Sync	IPI	PR:P31001	Mouse	PMID:11694502
Cellular Component	GO:0005737	cytoplasm	Sync	IDA		Mouse	PMID:11053421
Cellular Component	GO:0005829	cytosol	Sync	IDA		Mouse	PMID:11694502
Cellular Component	GO:0031594	neuromuscular junction	Sync	IDA		Mouse	PMID:11330864
Cellular Component	GO:0042383	sarcolemma	Sync	IDA		Mouse	PMID:11694502
Cellular Component	GO:0030018	Z disc	Sync	IDA		Mouse	PMID:11694502
Biological Process	GO:0045103	intermediate filament-based process	Sync	IDA		Mouse	PMID:11330864

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern